Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC002472.2-201ENST00000442739 958 ntBASIC21.29■■□□□ 1
COL13A1Q5TAT6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.29■■□□□ 1
COL13A1Q5TAT6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL13A1Q5TAT6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.29■■□□□ 1
COL13A1Q5TAT6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.29■■□□□ 1
COL13A1Q5TAT6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 AC092865.6-201ENST00000642101 219 ntBASIC21.28■■□□□ 1
COL13A1Q5TAT6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL13A1Q5TAT6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL13A1Q5TAT6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.27■■□□□ 1
COL13A1Q5TAT6 AL390955.2-201ENST00000603032 514 ntBASIC21.27■■□□□ 1
COL13A1Q5TAT6 AC025062.2-201ENST00000605477 670 ntBASIC21.27■■□□□ 1
COL13A1Q5TAT6 AL513190.1-201ENST00000621254 727 ntBASIC21.27■■□□□ 1
COL13A1Q5TAT6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL13A1Q5TAT6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL13A1Q5TAT6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL13A1Q5TAT6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
COL13A1Q5TAT6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL13A1Q5TAT6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 AC002310.6-201ENST00000624451 1377 ntBASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 MKNK2P1-201ENST00000437526 628 ntBASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 ATP5G2P4-201ENST00000442175 420 ntBASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 RN7SL204P-201ENST00000582831 262 ntBASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
COL13A1Q5TAT6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms