Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 AC142381.4-202ENST00000563973 229 ntBASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 RARRES2P10-201ENST00000564312 460 ntBASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 AC083906.6-201ENST00000641366 219 ntBASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.74■□□□□ 0.75
ATP13A4Q4VNC1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 AC007613.1-201ENST00000572811 2597 ntBASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 KRT16P1-201ENST00000399124 1418 ntBASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 ANO7L1-203ENST00000602586 1720 ntBASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATP13A4Q4VNC1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 AC073195.1-201ENST00000607241 877 ntBASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATP13A4Q4VNC1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AC004951.3-201ENST00000418645 1148 ntBASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AC130371.2-201ENST00000619443 611 ntBASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
ATP13A4Q4VNC1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms