Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC33.34■■■□□ 2.93
HMGXB3Q12766 AC020907.5-201ENST00000624372 1936 ntBASIC33.34■■■□□ 2.93
HMGXB3Q12766 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
HMGXB3Q12766 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
HMGXB3Q12766 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
HMGXB3Q12766 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC33.33■■■□□ 2.93
HMGXB3Q12766 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC33.33■■■□□ 2.93
HMGXB3Q12766 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC33.32■■■□□ 2.93
HMGXB3Q12766 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 AC005104.2-201ENST00000427818 678 ntBASIC33.32■■■□□ 2.92
HMGXB3Q12766 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC33.32■■■□□ 2.92
HMGXB3Q12766 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
HMGXB3Q12766 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 RCC2P3-201ENST00000418112 1537 ntBASIC33.31■■■□□ 2.92
HMGXB3Q12766 ME2-216ENST00000639850 2331 ntTSL 5 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
HMGXB3Q12766 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
HMGXB3Q12766 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
HMGXB3Q12766 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
HMGXB3Q12766 CCS-201ENST00000310190 942 ntTSL 5 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 AL355385.1-201ENST00000606123 409 ntBASIC33.31■■■□□ 2.92
HMGXB3Q12766 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
HMGXB3Q12766 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC33.31■■■□□ 2.92
HMGXB3Q12766 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 GGCT-205ENST00000409436 954 ntTSL 3 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 PMS2P2-201ENST00000425039 1128 ntBASIC33.3■■■□□ 2.92
HMGXB3Q12766 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC33.3■■■□□ 2.92
HMGXB3Q12766 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
HMGXB3Q12766 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC33.29■■■□□ 2.92
HMGXB3Q12766 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC33.29■■■□□ 2.92
HMGXB3Q12766 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC33.29■■■□□ 2.92
HMGXB3Q12766 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC33.29■■■□□ 2.92
HMGXB3Q12766 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC33.29■■■□□ 2.92
HMGXB3Q12766 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
HMGXB3Q12766 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 FGFR3P6-201ENST00000457012 610 ntBASIC33.28■■■□□ 2.92
HMGXB3Q12766 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
HMGXB3Q12766 POM121L3P-201ENST00000419331 1163 ntBASIC33.28■■■□□ 2.92
HMGXB3Q12766 IGHV3-22-201ENST00000520721 359 ntBASIC33.28■■■□□ 2.92
HMGXB3Q12766 IRF8-202ENST00000562492 946 ntTSL 3 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
HMGXB3Q12766 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC33.27■■■□□ 2.92
HMGXB3Q12766 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC33.27■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms