Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.99■□□□□ 0.63
CSNK1DP48730 FAM210CP-201ENST00000445714 574 ntBASIC18.99■□□□□ 0.63
CSNK1DP48730 ATP5G1P1-201ENST00000448724 379 ntBASIC18.99■□□□□ 0.63
CSNK1DP48730 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 AC141257.4-201ENST00000634557 245 ntBASIC18.99■□□□□ 0.63
CSNK1DP48730 AC136944.6-201ENST00000634818 245 ntBASIC18.99■□□□□ 0.63
CSNK1DP48730 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1DP48730 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CSNK1DP48730 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.99■□□□□ 0.63
CSNK1DP48730 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.99■□□□□ 0.63
CSNK1DP48730 HEIH-201ENST00000623091 1652 ntBASIC18.98■□□□□ 0.63
CSNK1DP48730 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1DP48730 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1DP48730 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 BX664615.1-201ENST00000443558 458 ntBASIC18.98■□□□□ 0.63
CSNK1DP48730 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.98■□□□□ 0.63
CSNK1DP48730 NEK4P2-201ENST00000580004 1012 ntBASIC18.98■□□□□ 0.63
CSNK1DP48730 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CSNK1DP48730 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1DP48730 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1DP48730 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1DP48730 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CSNK1DP48730 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.98■□□□□ 0.63
CSNK1DP48730 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1DP48730 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1DP48730 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.97■□□□□ 0.63
CSNK1DP48730 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.97■□□□□ 0.63
CSNK1DP48730 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CSNK1DP48730 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CSNK1DP48730 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CSNK1DP48730 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.97■□□□□ 0.63
CSNK1DP48730 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1DP48730 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1DP48730 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1DP48730 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1DP48730 MIR564-202ENST00000385049 94 ntBASIC18.96■□□□□ 0.63
CSNK1DP48730 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1DP48730 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1DP48730 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CSNK1DP48730 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1DP48730 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1DP48730 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1DP48730 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1DP48730 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.95■□□□□ 0.62
CSNK1DP48730 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSNK1DP48730 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSNK1DP48730 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 AP000523.1-201ENST00000398242 1049 ntBASIC18.95■□□□□ 0.62
CSNK1DP48730 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1DP48730 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1DP48730 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1DP48730 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.95■□□□□ 0.62
CSNK1DP48730 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.95■□□□□ 0.62
CSNK1DP48730 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.95■□□□□ 0.62
CSNK1DP48730 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CSNK1DP48730 AL031432.5-201ENST00000641059 760 ntBASIC18.95■□□□□ 0.62
CSNK1DP48730 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1DP48730 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1DP48730 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms