Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH3P22223 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH3P22223 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH3P22223 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH3P22223 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH3P22223 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CDH3P22223 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 LINC01568-207ENST00000641790 1380 ntBASIC18.53■□□□□ 0.56
CDH3P22223 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH3P22223 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH3P22223 CYP2D8P-201ENST00000433633 1490 ntBASIC18.52■□□□□ 0.56
CDH3P22223 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH3P22223 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
CDH3P22223 MFAP1P1-201ENST00000442257 1255 ntBASIC18.52■□□□□ 0.56
CDH3P22223 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH3P22223 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH3P22223 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH3P22223 AC012306.2-201ENST00000609350 630 ntBASIC18.52■□□□□ 0.56
CDH3P22223 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH3P22223 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH3P22223 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH3P22223 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH3P22223 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH3P22223 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.52■□□□□ 0.55
CDH3P22223 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CDH3P22223 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDH3P22223 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH3P22223 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH3P22223 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CDH3P22223 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH3P22223 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH3P22223 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH3P22223 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH3P22223 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH3P22223 AC145285.6-201ENST00000604632 637 ntBASIC18.51■□□□□ 0.55
CDH3P22223 AC010947.1-201ENST00000623454 693 ntBASIC18.51■□□□□ 0.55
CDH3P22223 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH3P22223 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH3P22223 ZNF815P-204ENST00000434898 1737 ntBASIC18.51■□□□□ 0.55
CDH3P22223 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH3P22223 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH3P22223 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH3P22223 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH3P22223 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CDH3P22223 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH3P22223 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH3P22223 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH3P22223 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 AC020916.1-201ENST00000587762 1774 ntBASIC18.5■□□□□ 0.55
CDH3P22223 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.5■□□□□ 0.55
CDH3P22223 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH3P22223 KRT18P22-201ENST00000402024 1347 ntBASIC18.49■□□□□ 0.55
CDH3P22223 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH3P22223 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH3P22223 KRT8P41-201ENST00000533985 1514 ntBASIC18.49■□□□□ 0.55
CDH3P22223 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH3P22223 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH3P22223 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH3P22223 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH3P22223 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH3P22223 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms