Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CD4P01730 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 AL162741.1-201ENST00000565563 1558 ntBASIC20.92■□□□□ 0.94
CD4P01730 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CD4P01730 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.92■□□□□ 0.94
CD4P01730 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.92■□□□□ 0.94
CD4P01730 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD4P01730 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
CD4P01730 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.91■□□□□ 0.94
CD4P01730 HLA-F-220ENST00000434407 884 ntBASIC20.91■□□□□ 0.94
CD4P01730 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.91■□□□□ 0.94
CD4P01730 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.91■□□□□ 0.94
CD4P01730 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.91■□□□□ 0.94
CD4P01730 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.91■□□□□ 0.94
CD4P01730 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CD4P01730 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD4P01730 AC093525.10-201ENST00000625130 1569 ntBASIC20.91■□□□□ 0.94
CD4P01730 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CD4P01730 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.9■□□□□ 0.94
CD4P01730 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.9■□□□□ 0.94
CD4P01730 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.9■□□□□ 0.94
CD4P01730 AL023284.2-201ENST00000405850 579 ntBASIC20.9■□□□□ 0.94
CD4P01730 SEC1P-202ENST00000473944 940 ntBASIC20.9■□□□□ 0.94
CD4P01730 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD4P01730 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.9■□□□□ 0.94
CD4P01730 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD4P01730 AC036111.1-201ENST00000533973 1582 ntBASIC20.89■□□□□ 0.94
CD4P01730 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CD4P01730 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CD4P01730 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.89■□□□□ 0.93
CD4P01730 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD4P01730 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD4P01730 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.89■□□□□ 0.93
CD4P01730 CHCHD2P8-201ENST00000429873 447 ntBASIC20.89■□□□□ 0.93
CD4P01730 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CD4P01730 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CD4P01730 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CD4P01730 IFNL4P1-201ENST00000607083 540 ntBASIC20.89■□□□□ 0.93
CD4P01730 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.89■□□□□ 0.93
CD4P01730 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.89■□□□□ 0.93
CD4P01730 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD4P01730 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CD4P01730 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CD4P01730 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.89■□□□□ 0.93
CD4P01730 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CD4P01730 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.88■□□□□ 0.93
CD4P01730 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD4P01730 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD4P01730 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.88■□□□□ 0.93
CD4P01730 TSPY19P-201ENST00000418461 509 ntBASIC20.88■□□□□ 0.93
CD4P01730 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CD4P01730 TSPY18P-201ENST00000441642 509 ntBASIC20.88■□□□□ 0.93
CD4P01730 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD4P01730 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.88■□□□□ 0.93
CD4P01730 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CD4P01730 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.88■□□□□ 0.93
CD4P01730 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.88■□□□□ 0.93
CD4P01730 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.88■□□□□ 0.93
CD4P01730 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD4P01730 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.88■□□□□ 0.93
CD4P01730 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CD4P01730 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms