Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX4O95219 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX4O95219 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.79■□□□□ 0.44
SNX4O95219 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX4O95219 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.79■□□□□ 0.44
SNX4O95219 AC026471.5-201ENST00000615068 467 ntBASIC17.79■□□□□ 0.44
SNX4O95219 CR392000.1-201ENST00000624770 1228 ntBASIC17.79■□□□□ 0.44
SNX4O95219 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX4O95219 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNX4O95219 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNX4O95219 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX4O95219 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX4O95219 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SNX4O95219 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.79■□□□□ 0.44
SNX4O95219 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 AC005332.8-201ENST00000622750 2735 ntBASIC17.78■□□□□ 0.44
SNX4O95219 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SNX4O95219 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.78■□□□□ 0.44
SNX4O95219 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.78■□□□□ 0.44
SNX4O95219 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SNX4O95219 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 AC131212.4-201ENST00000623606 975 ntBASIC17.78■□□□□ 0.44
SNX4O95219 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
SNX4O95219 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.78■□□□□ 0.44
SNX4O95219 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SNX4O95219 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNX4O95219 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SNX4O95219 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
SNX4O95219 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX4O95219 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNX4O95219 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX4O95219 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 NUDT16P1-203ENST00000513809 620 ntBASIC17.77■□□□□ 0.44
SNX4O95219 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.77■□□□□ 0.44
SNX4O95219 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 AC026271.3-201ENST00000571884 352 ntBASIC17.77■□□□□ 0.44
SNX4O95219 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SNX4O95219 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.77■□□□□ 0.44
SNX4O95219 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.77■□□□□ 0.44
SNX4O95219 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNX4O95219 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.77■□□□□ 0.44
SNX4O95219 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.77■□□□□ 0.43
SNX4O95219 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX4O95219 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNX4O95219 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNX4O95219 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.76■□□□□ 0.43
SNX4O95219 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.76■□□□□ 0.43
SNX4O95219 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.76■□□□□ 0.43
SNX4O95219 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms