Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPEO14579 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
COPEO14579 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.94■□□□□ 0.62
COPEO14579 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 AC026271.2-201ENST00000428091 497 ntBASIC18.94■□□□□ 0.62
COPEO14579 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.94■□□□□ 0.62
COPEO14579 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.94■□□□□ 0.62
COPEO14579 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
COPEO14579 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
COPEO14579 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
COPEO14579 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPEO14579 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COPEO14579 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 AL162430.1-201ENST00000480705 870 ntBASIC18.93■□□□□ 0.62
COPEO14579 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.93■□□□□ 0.62
COPEO14579 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.93■□□□□ 0.62
COPEO14579 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
COPEO14579 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COPEO14579 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COPEO14579 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPEO14579 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.92■□□□□ 0.62
COPEO14579 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.92■□□□□ 0.62
COPEO14579 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.92■□□□□ 0.62
COPEO14579 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COPEO14579 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 MIPEPP3-201ENST00000412105 444 ntBASIC18.92■□□□□ 0.62
COPEO14579 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.92■□□□□ 0.62
COPEO14579 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.92■□□□□ 0.62
COPEO14579 AC080038.1-201ENST00000611274 1154 ntBASIC18.92■□□□□ 0.62
COPEO14579 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
COPEO14579 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.92■□□□□ 0.62
COPEO14579 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.92■□□□□ 0.62
COPEO14579 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPEO14579 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
COPEO14579 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.91■□□□□ 0.62
COPEO14579 AC073592.3-201ENST00000625118 1834 ntBASIC18.91■□□□□ 0.62
COPEO14579 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
COPEO14579 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.91■□□□□ 0.62
COPEO14579 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 RARRES2P6-201ENST00000567333 442 ntBASIC18.91■□□□□ 0.62
COPEO14579 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.91■□□□□ 0.62
COPEO14579 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.91■□□□□ 0.62
COPEO14579 AC073111.5-205ENST00000641717 521 ntBASIC18.91■□□□□ 0.62
COPEO14579 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.91■□□□□ 0.62
COPEO14579 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPEO14579 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms