Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 ALG1L5P-201ENST00000482043 771 ntBASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 AC069262.1-201ENST00000539058 672 ntBASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC85CA6NKD9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 MCCD1P1-208ENST00000445732 328 ntBASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC85CA6NKD9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC85CA6NKD9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 RCN1P2-201ENST00000398357 915 ntBASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC85CA6NKD9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85CA6NKD9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85CA6NKD9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CCDC85CA6NKD9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC85CA6NKD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC85CA6NKD9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms