Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AC104692.2-201ENST00000603054 253 ntBASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.19■□□□□ 0.5
TRABD2BA6NFA1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 AC034232.1-201ENST00000506026 1064 ntBASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 AP002414.4-201ENST00000589764 1148 ntBASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRABD2BA6NFA1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.17■□□□□ 0.5
TRABD2BA6NFA1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 TSPY19P-201ENST00000418461 509 ntBASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 TSPY18P-201ENST00000441642 509 ntBASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 AL732292.2-201ENST00000609649 430 ntBASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRABD2BA6NFA1 AC092720.2-201ENST00000602388 1665 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms