Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.6□□□□□ -1.83
SNCAIPQ9Y6H5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNCAIPQ9Y6H5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SNCAIPQ9Y6H5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 SNORD115-30-201ENST00000364117 82 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 Y_RNA.272-201ENST00000364696 102 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 SNORD116-18-201ENST00000383961 92 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AL139281.1-201ENST00000422120 335 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AL365496.1-201ENST00000426885 215 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AC108938.1-201ENST00000451204 136 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 RPS20P10-201ENST00000451209 253 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 MIR4319-201ENST00000577285 85 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 ELOCP29-201ENST00000588193 334 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AL670379.2-201ENST00000604983 252 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 AC013412.1-201ENST00000610687 192 ntBASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SNCAIPQ9Y6H5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SNCAIPQ9Y6H5 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.182-201ENST00000363880 111 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-801P-201ENST00000364087 105 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 RNU4-17P-201ENST00000365598 141 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC097463.2-201ENST00000421074 142 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC022018.1-201ENST00000430685 241 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 TOMM22P2-201ENST00000430735 237 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC105272.1-201ENST00000438604 198 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC136628.3-201ENST00000521868 290 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 MIR3945-201ENST00000581853 98 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC134026.1-201ENST00000623249 2239 ntBASIC3.58□□□□□ -1.84
SNCAIPQ9Y6H5 AC093908.1-201ENST00000623125 8092 ntBASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 AC073325.2-201ENST00000339545 159 ntBASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 RNU1-105P-201ENST00000363470 161 ntBASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.291-201ENST00000364886 113 ntBASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-1130P-201ENST00000365434 107 ntBASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SNCAIPQ9Y6H5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AC010329.5-201ENST00000623497 2174 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AC062016.1-201ENST00000355719 319 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 U3.8-201ENST00000363675 217 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-1305P-201ENST00000364353 104 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.293-201ENST00000364908 93 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 SNORD50.2-201ENST00000365465 70 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.357-201ENST00000365487 109 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-1027P-201ENST00000383998 107 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.412-201ENST00000384001 104 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 SNORA67.2-201ENST00000384300 149 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 MIR548B-201ENST00000385247 97 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 SNORA26.5-201ENST00000391215 123 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 RNA5SP354-201ENST00000391247 136 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-710P-201ENST00000410424 105 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AC006539.3-201ENST00000454258 129 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 MIR548AI-201ENST00000579940 88 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AC008739.2-201ENST00000597006 317 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 AL136360.1-201ENST00000503377 1900 ntBASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.56□□□□□ -1.84
SNCAIPQ9Y6H5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-1048P-201ENST00000364054 107 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RNA5SP139-201ENST00000364340 117 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RNU6-312P-201ENST00000364629 107 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 Y_RNA.287-201ENST00000364853 94 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 AL135790.2-201ENST00000437701 267 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RPS27AP9-201ENST00000477681 438 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 RPL30P11-203ENST00000598995 310 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 AC013791.1-201ENST00000616619 62 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 AC090517.3-201ENST00000625170 141 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 MTND1P7-201ENST00000632801 297 ntBASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
SNCAIPQ9Y6H5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNCAIPQ9Y6H5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms