Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AC023157.2-201ENST00000540596 141 ntBASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 AL512605.2-201ENST00000592972 256 ntBASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 AC112484.5-201ENST00000624189 228 ntBASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.06□□□□□ -1.76
GTF3C3Q9Y5Q9 SNORA27.1-201ENST00000362604 124 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 Y_RNA.237-201ENST00000364439 102 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 AL355796.1-201ENST00000406706 323 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 RPL39P38-201ENST00000467018 153 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 AC025518.1-201ENST00000479856 347 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU6-826P-201ENST00000516827 104 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 AL353149.1-201ENST00000610667 244 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 RNA5SP196-201ENST00000625967 102 ntBASIC4.05□□□□□ -1.76
GTF3C3Q9Y5Q9 snoU2-30.2-201ENST00000362805 70 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 Y_RNA.361-201ENST00000365515 120 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR515-2-201ENST00000384883 83 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR515-1-201ENST00000384884 83 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR524-201ENST00000385242 87 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 SNORD17-201ENST00000390930 237 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR548H3-201ENST00000408771 118 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 AC016909.1-201ENST00000415916 166 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 CR769767.1-201ENST00000436337 346 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 HMGN2P34-201ENST00000437647 269 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR2682-201ENST00000580305 110 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR3939-201ENST00000582614 106 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 AC005786.1-201ENST00000588553 154 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 SNORD14A-201ENST00000606526 91 ntBASIC4.04□□□□□ -1.76
GTF3C3Q9Y5Q9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU11-3P-201ENST00000391111 133 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RNA5SP465-201ENST00000391195 109 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 HMGN2P39-201ENST00000398005 273 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RPS27P22-201ENST00000478056 241 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RNA5SP20-201ENST00000515976 84 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU6-1041P-201ENST00000516254 102 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 RNU6-966P-201ENST00000516479 104 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 MIR3169-201ENST00000578032 83 ntBASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GTF3C3Q9Y5Q9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.14-201ENST00000362415 103 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU6-407P-201ENST00000365280 104 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.350-201ENST00000365409 98 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 SNORA11.4-201ENST00000408823 129 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU2-61P-201ENST00000411069 191 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 RPL23AP7-203ENST00000449021 469 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 HSPE1P13-201ENST00000451143 297 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR6748-201ENST00000610433 71 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 AC007318.2-201ENST00000620999 243 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 AL354798.1-201ENST00000622505 329 ntBASIC4.02□□□□□ -1.77
GTF3C3Q9Y5Q9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 RN7SKP111-201ENST00000410349 271 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 ATP5A1P2-201ENST00000412323 255 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC018634.1-201ENST00000437554 401 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MRPS10P1-201ENST00000448483 130 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC106707.2-201ENST00000484182 374 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU1-104P-201ENST00000517280 175 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC027419.1-201ENST00000522976 328 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC025884.1-201ENST00000556034 378 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR3670-2-201ENST00000582974 65 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR3670-1-201ENST00000584160 65 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR3670-3-201ENST00000584855 65 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC078899.2-201ENST00000595282 212 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 DEFB117-201ENST00000602356 141 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 AC006006.1-201ENST00000603082 144 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR3670-4-201ENST00000612260 65 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR6758-201ENST00000620653 63 ntBASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
GTF3C3Q9Y5Q9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.478-201ENST00000384358 107 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU6-505P-201ENST00000384427 107 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR518A2-201ENST00000384966 87 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 MRPL49P2-201ENST00000521066 465 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 MIR338-201ENST00000636369 67 ntBASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GTF3C3Q9Y5Q9 RNU1-35P-201ENST00000362782 153 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 Y_RNA.352-201ENST00000365439 102 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 MT-TG-201ENST00000387429 68 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 HMGN2P35-201ENST00000412164 270 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 MTCO1P5-201ENST00000433573 344 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 AC009220.1-201ENST00000451614 275 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 AC091153.1-201ENST00000466297 402 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 AL049873.1-201ENST00000480540 376 ntBASIC3.99□□□□□ -1.77
GTF3C3Q9Y5Q9 SNORA27.4-201ENST00000516650 95 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms