Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
PCDHA2Q9Y5H9 SNORA9.2-201ENST00000365361 133 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 MIR29B2-201ENST00000385055 81 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 MIR591-201ENST00000385290 95 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AC105272.1-201ENST00000438604 198 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AP004217.1-201ENST00000480579 346 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 MRPS36P2-201ENST00000512569 299 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 RN7SKP132-201ENST00000516001 208 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-436P-201ENST00000516171 114 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AC008739.2-201ENST00000597006 317 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 RPL12P50-201ENST00000603116 116 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AL670379.2-201ENST00000604983 252 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AC005828.6-201ENST00000606610 232 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AC107294.3-201ENST00000609211 526 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 AC002064.3-201ENST00000623448 346 ntBASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PCDHA2Q9Y5H9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-486P-201ENST00000363116 107 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 U3.8-201ENST00000363675 217 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 Y_RNA.329-201ENST00000365209 107 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RNU6-1248P-201ENST00000391096 64 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 U3.40-201ENST00000408706 208 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 Y_RNA.597-201ENST00000410463 100 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RPL23AP94-201ENST00000512518 302 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RNU1-117P-201ENST00000517041 158 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 AC008873.1-201ENST00000625051 138 ntBASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.22□□□□□ -1.89
PCDHA2Q9Y5H9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PCDHA2Q9Y5H9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1020P-201ENST00000363684 107 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-682P-201ENST00000363843 106 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-47P-201ENST00000383866 107 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 Y_RNA.464-201ENST00000384282 110 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 COX6CP10-201ENST00000416832 224 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 TOMM22P2-201ENST00000430735 237 ntBASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHA2Q9Y5H9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 MIR548M-201ENST00000408260 86 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 RNU4-61P-201ENST00000411243 107 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 MIR3162-201ENST00000581818 82 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC072026.1-201ENST00000605023 201 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC090115.4-201ENST00000609970 188 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 snoU18.1-201ENST00000629629 71 ntBASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHA2Q9Y5H9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-545P-201ENST00000362681 104 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 AL451074.5-201ENST00000415894 435 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 RAC1P5-201ENST00000512182 576 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 AL137100.2-201ENST00000555786 315 ntBASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDHA2Q9Y5H9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1272P-201ENST00000362776 107 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 SNORD115-30-201ENST00000364117 82 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 Y_RNA.243-201ENST00000364481 109 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 Y_RNA.304-201ENST00000365011 112 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-211P-201ENST00000384047 107 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 MIR586-201ENST00000385035 97 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 RNU1-101P-201ENST00000391171 127 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms