Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 MIR6844-201ENST00000637122 62 ntBASIC3.82□□□□□ -1.8
USP20Q9Y2K6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 CENPCP1-201ENST00000533085 2578 ntBASIC3.82□□□□□ -1.8
USP20Q9Y2K6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
USP20Q9Y2K6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.81□□□□□ -1.8
USP20Q9Y2K6 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
USP20Q9Y2K6 RNA5SP50-201ENST00000363731 107 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 SNORD46.1-201ENST00000364139 104 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 RNU6-597P-201ENST00000365620 102 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 SNORA36B-201ENST00000410438 131 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 AC097463.2-201ENST00000421074 142 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 SNORA31.1-201ENST00000515993 133 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 SNORA31.5-201ENST00000516190 133 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.81□□□□□ -1.8
USP20Q9Y2K6 U7.2-201ENST00000607576 63 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 AC093732.2-201ENST00000607950 274 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 AC006111.3-201ENST00000622137 383 ntBASIC3.81□□□□□ -1.8
USP20Q9Y2K6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP20Q9Y2K6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 SNORA20-201ENST00000384662 132 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 SNORA12-201ENST00000391162 147 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 SNORA75.5-201ENST00000391291 81 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 MIR1278-201ENST00000408753 81 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 HSPE1P21-201ENST00000438283 308 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 AL357552.1-201ENST00000445254 415 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 RPL21P10-201ENST00000463521 490 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 RN7SKP179-201ENST00000516126 217 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 RNU6-659P-201ENST00000516454 104 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 AC127455.1-201ENST00000565496 145 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 MIR3186-201ENST00000577404 85 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.8□□□□□ -1.8
USP20Q9Y2K6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.8□□□□□ -1.8
USP20Q9Y2K6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AC093010.3-201ENST00000570269 15214 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 SNORA27.1-201ENST00000362604 124 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNU6-674P-201ENST00000363831 107 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 Y_RNA.251-201ENST00000364551 99 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNU6-768P-201ENST00000384683 107 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNA5SP496-201ENST00000391240 109 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AL355796.1-201ENST00000406706 323 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 MIR1283-1-201ENST00000408494 87 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AL121890.1-201ENST00000435457 205 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AC010598.1-201ENST00000510378 103 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNU5F-4P-201ENST00000516581 114 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNU6-1098P-201ENST00000516772 96 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RNU6-1234P-201ENST00000516877 103 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AL670379.2-201ENST00000604983 252 ntBASIC3.79□□□□□ -1.8
USP20Q9Y2K6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.79□□□□□ -1.8
USP20Q9Y2K6 AL049781.1-201ENST00000623195 3585 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RNU6-1325P-201ENST00000364905 105 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 MIR518C-201ENST00000384822 101 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AL139095.1-201ENST00000404326 391 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RNU2-55P-201ENST00000411146 174 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RN7SKP101-201ENST00000411376 320 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RNU6-221P-201ENST00000459541 99 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RPS26P55-201ENST00000471178 356 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RPS27P26-201ENST00000494583 239 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RNU6-561P-201ENST00000516222 102 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RNU6-1337P-201ENST00000516525 95 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 Y_RNA.686-201ENST00000516548 134 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AP001328.1-201ENST00000528550 176 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AL160236.1-201ENST00000556317 195 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC007179.3-201ENST00000604976 235 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC006435.5-201ENST00000624486 112 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 AC068647.2-201ENST00000637380 353 ntBASIC3.78□□□□□ -1.8
USP20Q9Y2K6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP20Q9Y2K6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms