Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PDZRN3Q9UPQ7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 RNY4P6-201ENST00000363667 96 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 RNU1-33P-201ENST00000364249 162 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 SNORA63D-201ENST00000364359 132 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 AC244670.1-201ENST00000436879 112 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 RNA5SP57-201ENST00000459463 123 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 AC084364.2-201ENST00000546924 395 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 AL137067.1-201ENST00000615933 120 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PDZRN3Q9UPQ7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 RNU6-283P-201ENST00000364788 107 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 Y_RNA.634-201ENST00000364811 113 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 SNORD87-201ENST00000364849 89 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 Y_RNA.366-201ENST00000365540 102 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 RNU6-837P-201ENST00000391056 108 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 RNU2-68P-201ENST00000410878 191 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 RNA5SP127-201ENST00000411051 133 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 BX510359.1-201ENST00000456973 237 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 RPL23AP14-201ENST00000468281 468 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 AC008011.1-201ENST00000545989 227 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 AL049861.1-201ENST00000603130 150 ntBASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PDZRN3Q9UPQ7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
PDZRN3Q9UPQ7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.65□□□□□ -1.66
PDZRN3Q9UPQ7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PDZRN3Q9UPQ7 Y_RNA.198-201ENST00000364013 98 ntBASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 SNORA7.2-201ENST00000364446 145 ntBASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 RNU2-70P-201ENST00000410718 179 ntBASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.65□□□□□ -1.67
PDZRN3Q9UPQ7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 MIR607-201ENST00000385241 96 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 MIR889-201ENST00000401280 79 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 RNA5SP120-201ENST00000410900 112 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 AC244098.2-201ENST00000422068 99 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 AL356867.1-201ENST00000429623 299 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 AC103975.1-201ENST00000482506 483 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 SNORA70.14-201ENST00000516205 110 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 SCARNA15.2-201ENST00000516409 127 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 SCARNA15.3-201ENST00000626315 122 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 SCARNA4.1-201ENST00000628597 123 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 USP8P1-201ENST00000494673 3183 ntBASIC4.64□□□□□ -1.67
PDZRN3Q9UPQ7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 MIR490-201ENST00000384865 128 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 MIR320B2-201ENST00000408479 138 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 AC007919.1-201ENST00000429380 217 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-437P-201ENST00000459408 95 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RPL23AP67-201ENST00000465341 474 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 SCARNA23-201ENST00000516060 130 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-830P-201ENST00000516353 107 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-113P-201ENST00000516653 101 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 SNORA31.16-201ENST00000516773 139 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 MAPK10-373ENST00000641983 6772 ntBASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDZRN3Q9UPQ7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RNU6-674P-201ENST00000363831 107 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RNU4-41P-201ENST00000364426 143 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 AP002088.1-201ENST00000382740 395 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RNA5SP424-201ENST00000390988 115 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 RNA5SP504-201ENST00000410676 117 ntBASIC4.62□□□□□ -1.67
PDZRN3Q9UPQ7 AC004866.1-201ENST00000411748 78 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms