Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 HSPE1P13-201ENST00000451143 297 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 SNORA84-201ENST00000459229 133 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AC117454.1-201ENST00000491120 168 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 RPL21P129-201ENST00000491732 478 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 MIR2276-201ENST00000516886 89 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 IGKV2-26-201ENST00000518305 343 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AP001328.1-201ENST00000528550 176 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 RPL17P51-201ENST00000605218 238 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 XIST_intron.1-201ENST00000619444 68 ntBASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP4E1Q9UPM8 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AL356274.2-201ENST00000624379 3752 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1180P-201ENST00000364935 107 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1056P-201ENST00000383996 107 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RNY3P5-201ENST00000384127 102 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 Y_RNA.525-201ENST00000384570 113 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 SNORA75.5-201ENST00000391291 81 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 SNORA36B-201ENST00000410438 131 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 YME1L1P1-201ENST00000429435 297 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 HSPE1P21-201ENST00000438283 308 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RNU7-107P-201ENST00000459121 61 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RPS29P2-201ENST00000479278 136 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1337P-201ENST00000516525 95 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 SNORA67.7-201ENST00000516664 135 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AC068647.2-201ENST00000637380 353 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 AC017071.1-201ENST00000564407 2204 ntBASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP4E1Q9UPM8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 SNORA51.4-201ENST00000364993 124 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 Y_RNA.521-201ENST00000384560 114 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 MIR23B-201ENST00000384832 97 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AL121890.1-201ENST00000435457 205 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AC021205.2-201ENST00000480069 347 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 RNU6-1098P-201ENST00000516772 96 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AC127455.1-201ENST00000565496 145 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 AP003357.1-201ENST00000604497 148 ntBASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP4E1Q9UPM8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 SNORD45.3-201ENST00000363836 72 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RNU6-915P-201ENST00000364943 103 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RNU6-429P-201ENST00000384582 108 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RNA5SP252-201ENST00000391131 119 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RPL36AP48-201ENST00000485521 314 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 YWHAEP4-201ENST00000505390 198 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 RNU2-56P-201ENST00000516826 190 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 AC093732.2-201ENST00000607950 274 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 uc_338.14-201ENST00000613162 166 ntBASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
AP4E1Q9UPM8 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 RNA5SP50-201ENST00000363731 107 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 RNU6-597P-201ENST00000365620 102 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 SNORA20B-201ENST00000384220 132 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 MIR518C-201ENST00000384822 101 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 MIR490-201ENST00000384865 128 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 EIF4EP4-201ENST00000424916 578 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 RPS26P55-201ENST00000471178 356 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 RN7SKP179-201ENST00000516126 217 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 Y_RNA.712-201ENST00000517011 92 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 AC120024.3-201ENST00000603167 156 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 GABRG2-229ENST00000641017 3628 ntBASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
AP4E1Q9UPM8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
AP4E1Q9UPM8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms