Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AC018630.3-201ENST00000542637 96 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 EIF4BP1-201ENST00000554881 351 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AL713866.2-201ENST00000603579 219 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 AL159152.1-201ENST00000635019 2587 ntBASIC2.9□□□□□ -1.95
CDC42EP3Q9UKI2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 AL513302.2-201ENST00000562313 1842 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.75-201ENST00000362927 97 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-312P-201ENST00000364629 107 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 RNU4-17P-201ENST00000365598 141 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 SNORA19-201ENST00000384737 128 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 AL357075.1-201ENST00000404107 726 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 MIR1283-1-201ENST00000408494 87 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 MIR1294-201ENST00000408503 142 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDC42EP3Q9UKI2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-944P-201ENST00000364023 107 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-381P-201ENST00000391259 108 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 AL355497.1-201ENST00000406262 551 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 U6atac.2-201ENST00000408644 118 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SKP111-201ENST00000410349 271 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 AC083906.5-201ENST00000503722 328 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 SNORA70.12-201ENST00000516084 153 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 RNA5SP208-201ENST00000516156 78 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 MIR5004-201ENST00000579078 107 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 Z83843.1-201ENST00000604070 3685 ntBASIC2.88□□□□□ -1.95
CDC42EP3Q9UKI2 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.23-201ENST00000362496 106 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.398-201ENST00000383952 99 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 MIR613-201ENST00000385248 95 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 SNORD17-201ENST00000390930 237 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 TMSB4XP3-201ENST00000445144 114 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL429P-201ENST00000479090 223 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL489P-201ENST00000486185 223 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL327P-201ENST00000488659 223 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 FCF1P8-201ENST00000510322 597 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 SNORA70.18-201ENST00000516696 98 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AC104465.1-201ENST00000611365 139 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL853P-201ENST00000617250 223 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AC090517.3-201ENST00000625170 141 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AC132825.6-201ENST00000638861 357 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AL035425.3-201ENST00000564206 4996 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 AC009487.4-201ENST00000624969 3585 ntBASIC2.87□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-899P-201ENST00000363947 107 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.272-201ENST00000364696 102 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-234P-201ENST00000365229 104 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.341-201ENST00000365341 102 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 CD24P4-201ENST00000382840 243 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 Y_RNA.412-201ENST00000384001 104 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-301P-201ENST00000384277 107 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 MIR626-201ENST00000385032 94 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC126124.2-201ENST00000413542 321 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RNU7-14P-201ENST00000459331 62 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 S100A11P2-201ENST00000467589 312 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RN7SL504P-201ENST00000494496 287 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC005840.1-201ENST00000498412 377 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC109329.2-201ENST00000519658 482 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC068657.1-201ENST00000520807 306 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 MIR5688-201ENST00000580619 83 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC104984.5-201ENST00000586878 94 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC025754.2-201ENST00000606491 432 ntBASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.86□□□□□ -1.95
CDC42EP3Q9UKI2 AC134026.1-201ENST00000623249 2239 ntBASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 RNU6-704P-201ENST00000364162 103 ntBASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 SNORA68.1-201ENST00000364537 132 ntBASIC2.85□□□□□ -1.95
CDC42EP3Q9UKI2 SNORD31B-201ENST00000364977 69 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms