Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.218-201ENST00000364218 104 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RNU4-41P-201ENST00000364426 143 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.273-201ENST00000364703 102 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RNU6-597P-201ENST00000365620 102 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 MIR218-1-201ENST00000384999 110 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 FO393413.1-201ENST00000402892 195 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RNU2-32P-201ENST00000411193 191 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 AC016909.1-201ENST00000415916 166 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 AL161788.1-201ENST00000441805 169 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RPS27P22-201ENST00000478056 241 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RNU6-63P-201ENST00000516690 95 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 RNU6-965P-201ENST00000516721 96 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 AL160236.1-201ENST00000556317 195 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 MIR2681-201ENST00000581814 105 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXD3Q9UJU5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.71-201ENST00000362892 104 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.542-201ENST00000384641 111 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 SNORA20-201ENST00000384662 132 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 MIR30B-201ENST00000384850 88 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 RNA5SP511-201ENST00000410487 115 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 DBIP2-201ENST00000419076 262 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 AC092991.1-201ENST00000477176 376 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 SNORA48.11-201ENST00000517015 89 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 MIR5047-201ENST00000579212 100 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 AL356280.1-201ENST00000603614 379 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 AC019176.2-201ENST00000611579 315 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 AL591424.2-201ENST00000617023 128 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 MAPK10-373ENST00000641983 6772 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 ZNF702P-202ENST00000434269 1966 ntBASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXD3Q9UJU5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.46□□□□□ -1.85
FOXD3Q9UJU5 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.46□□□□□ -1.85
FOXD3Q9UJU5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 MIR423-201ENST00000362201 94 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RNA5SP119-201ENST00000362715 117 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 SNORD46.1-201ENST00000364139 104 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RNU6-80P-201ENST00000384195 107 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RHEBP3-201ENST00000411920 351 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 GOT2P5-201ENST00000433995 546 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 SNRPGP8-201ENST00000454064 226 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RNU6-1211P-201ENST00000459179 105 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 CKS1BP2-201ENST00000497342 240 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RNU6-1333P-201ENST00000516162 93 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 RNU6-197P-201ENST00000516680 100 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 MIR378D2-201ENST00000580636 98 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.86
FOXD3Q9UJU5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 RNU1-22P-201ENST00000363334 158 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.587-201ENST00000391210 103 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.622-201ENST00000411091 108 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 MTCO1P44-201ENST00000441935 243 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC090515.1-201ENST00000465295 476 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC097462.1-201ENST00000514125 324 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 SNORA4.4-201ENST00000515921 135 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AL359881.1-201ENST00000602916 267 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 MIR486-1-201ENST00000612171 68 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AL121772.2-201ENST00000614331 297 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
FOXD3Q9UJU5 AL355596.1-201ENST00000565399 3996 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 SNORA71.3-201ENST00000362582 128 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.332-201ENST00000365271 113 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 Y_RNA.432-201ENST00000384087 111 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC123900.1-201ENST00000420390 96 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC063976.3-201ENST00000426849 329 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC245047.4-201ENST00000433189 144 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 CYCSP35-201ENST00000451978 304 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC093259.1-201ENST00000509755 300 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 RNU1-95P-201ENST00000516357 160 ntBASIC3.44□□□□□ -1.86
FOXD3Q9UJU5 RNU1-128P-201ENST00000516704 160 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms