Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 AC087588.2-201ENST00000617667 426 ntBASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 U2.1-201ENST00000618978 145 ntBASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 MIR6132-201ENST00000622083 109 ntBASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 AL606534.2-204ENST00000635008 178 ntBASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNU6-873P-201ENST00000363833 107 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNU4-52P-201ENST00000384209 138 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNU6-474P-201ENST00000384243 107 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNU6-1026P-201ENST00000384465 108 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNU6-482P-201ENST00000391068 107 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 MIR300-201ENST00000401138 83 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 EIF1P2-201ENST00000428233 350 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 SNORA25.14-201ENST00000516481 132 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 SNORA40.14-201ENST00000516543 86 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 MIR5695-201ENST00000579717 85 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 MIR5006-201ENST00000583027 110 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 AL356055.1-201ENST00000602528 446 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 AC006157.1-201ENST00000611750 366 ntBASIC2.38□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.179-201ENST00000363844 90 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 RNU6-793P-201ENST00000384233 104 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 RNY1P14-201ENST00000384426 108 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MCFD2P1-201ENST00000417812 300 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AL445646.1-201ENST00000431784 216 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC074290.1-201ENST00000448883 135 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC007395.1-201ENST00000451333 677 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 HMGN2P23-201ENST00000456759 269 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 RNU2-44P-201ENST00000516795 194 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC034114.1-201ENST00000520293 285 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MIR3171-201ENST00000584270 74 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MIR5002-201ENST00000584713 97 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 SNORD11B-201ENST00000607707 90 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC010999.1-201ENST00000611856 324 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 MIR4272-201ENST00000635924 64 ntBASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HDAC6Q9UBN7 AC009487.4-201ENST00000624969 3585 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 RNU6-222P-201ENST00000362438 107 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.422-201ENST00000384054 114 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 PMCHL1-202ENST00000423102 261 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 MTND4P19-201ENST00000446659 478 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC245102.2-201ENST00000448956 180 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 MTCO3P8-201ENST00000453691 755 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC114982.1-201ENST00000469402 321 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AL163540.1-201ENST00000485382 386 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC107032.1-201ENST00000485945 480 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC093852.1-201ENST00000503587 266 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 RNU6-991P-201ENST00000516168 107 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 MIR514B-201ENST00000516774 80 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC022868.1-201ENST00000517767 391 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 DEFB131C-201ENST00000528817 165 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC093023.1-201ENST00000547375 507 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AL442163.3-201ENST00000554110 156 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC020661.2-201ENST00000560114 134 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC006600.1-201ENST00000572529 153 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AC026271.5-201ENST00000577873 130 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AL132822.1-201ENST00000617063 513 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.36□□□□□ -2.03
HDAC6Q9UBN7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNU6-879P-201ENST00000364328 108 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 SNORD31B-201ENST00000364977 69 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNU6-281P-201ENST00000384212 103 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNY3P4-201ENST00000384428 101 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 MIR549A-201ENST00000385268 96 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNA5SP213-201ENST00000391031 106 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNU2-2P-201ENST00000410396 191 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 AL160004.2-201ENST00000432935 350 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RPL23AP7-203ENST00000449021 469 ntBASIC2.35□□□□□ -2.03
HDAC6Q9UBN7 RNU6-717P-201ENST00000459076 104 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms