Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL138825.1-201ENST00000618587 192 ntBASIC2.42□□□□□ -2.02
LRFN1Q9P244 FO624990.1-201ENST00000636373 85 ntBASIC2.42□□□□□ -2.02
LRFN1Q9P244 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LRFN1Q9P244 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.42□□□□□ -2.02
LRFN1Q9P244 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LRFN1Q9P244 RNU1-58P-201ENST00000362413 163 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 Y_RNA.145-201ENST00000363527 102 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 Y_RNA.527-201ENST00000384573 102 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AL033519.2-201ENST00000403958 392 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 RNU6-985P-201ENST00000410182 104 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC010095.1-201ENST00000443543 144 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC067942.3-201ENST00000512025 362 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 Y_RNA.683-201ENST00000516508 93 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 RNU6-911P-201ENST00000516523 104 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 RNA5SP148-201ENST00000516527 94 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 RN7SKP49-201ENST00000516675 260 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 CYCSP23-201ENST00000519781 313 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 HSBP1P1-201ENST00000555205 166 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.41□□□□□ -2.02
LRFN1Q9P244 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AL590808.1-201ENST00000618696 141 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AL162373.1-201ENST00000620433 407 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC012640.5-201ENST00000623897 319 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 AC009487.4-201ENST00000624969 3585 ntBASIC2.41□□□□□ -2.02
LRFN1Q9P244 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.4□□□□□ -2.02
LRFN1Q9P244 MTND5P35-201ENST00000557537 1720 ntBASIC2.4□□□□□ -2.02
LRFN1Q9P244 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.02
LRFN1Q9P244 SNORD115-3-201ENST00000363100 82 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU6-1305P-201ENST00000364353 104 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU6-1145P-201ENST00000384246 107 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU6-975P-201ENST00000384296 105 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNA5SP465-201ENST00000391195 109 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU6-1001P-201ENST00000411265 100 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.4□□□□□ -2.03
LRFN1Q9P244 AC139712.2-201ENST00000424302 339 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 AC074290.1-201ENST00000448883 135 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU6-475P-201ENST00000516073 104 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNA5SP282-201ENST00000516355 108 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 RNU2-19P-201ENST00000517288 84 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 MIR5188-201ENST00000583467 113 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 MZT1P2-201ENST00000604387 248 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 U2.1-201ENST00000618978 145 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 AL078596.1-201ENST00000624856 447 ntBASIC2.4□□□□□ -2.03
LRFN1Q9P244 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRFN1Q9P244 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRFN1Q9P244 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LRFN1Q9P244 SNORD114-6-201ENST00000364393 72 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 Y_RNA.415-201ENST00000384012 112 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 Y_RNA.459-201ENST00000384251 102 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 Y_RNA.595-201ENST00000410403 105 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 BX510359.4-201ENST00000423750 193 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC112492.4-201ENST00000456549 352 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.39□□□□□ -2.03
LRFN1Q9P244 RNU1-117P-201ENST00000517041 158 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 Y_RNA.720-201ENST00000517166 92 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC006600.1-201ENST00000572529 153 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 MIR3169-201ENST00000578032 83 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 VN1R91P-201ENST00000594377 169 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC136443.5-201ENST00000603741 370 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.39□□□□□ -2.03
LRFN1Q9P244 AC130454.1-201ENST00000622948 401 ntBASIC2.39□□□□□ -2.03
LRFN1Q9P244 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.39□□□□□ -2.03
LRFN1Q9P244 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRFN1Q9P244 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-1301P-201ENST00000362724 104 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 U3.8-201ENST00000363675 217 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNA5SP493-201ENST00000364115 91 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 SNORA25.6-201ENST00000364121 118 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 Y_RNA.389-201ENST00000383924 113 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-318P-201ENST00000384283 103 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-1235P-201ENST00000384559 107 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 MTCO3P19-201ENST00000415864 321 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-498P-201ENST00000459468 107 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-764P-201ENST00000516396 105 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-1046P-201ENST00000516538 107 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 SNORA40.14-201ENST00000516543 86 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 RNU6-856P-201ENST00000516959 98 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AP002770.2-201ENST00000543613 532 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AK6P2-201ENST00000549020 471 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.38□□□□□ -2.03
LRFN1Q9P244 AC078899.2-201ENST00000595282 212 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AL162730.1-201ENST00000605734 292 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 AC010297.1-201ENST00000623948 149 ntBASIC2.38□□□□□ -2.03
LRFN1Q9P244 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms