Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 RNU6-493P-201ENST00000391321 108 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC008134.1-201ENST00000420943 193 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AL135790.2-201ENST00000437701 267 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RPL23AP58-201ENST00000440453 469 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 HMGN2P18-201ENST00000450680 270 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC010598.1-201ENST00000510378 103 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RNY3P16-201ENST00000516338 101 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 RNA5SP490-201ENST00000517141 136 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC022559.1-201ENST00000520905 205 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 MIR4308-201ENST00000580634 81 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 AC013791.1-201ENST00000616619 62 ntBASIC3.31□□□□□ -1.88
UBP1Q9NZI7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
UBP1Q9NZI7 Y_RNA.310-201ENST00000365063 113 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 SNORA20B-201ENST00000384220 132 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 SNORA26.5-201ENST00000391215 123 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AL355497.1-201ENST00000406262 551 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 RNU6-57P-201ENST00000411348 103 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
UBP1Q9NZI7 RPL23AP7-203ENST00000449021 469 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 HSPE1P13-201ENST00000451143 297 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 U8.19-201ENST00000459095 133 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.3□□□□□ -1.88
UBP1Q9NZI7 HMGB3P3-201ENST00000510526 400 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.3□□□□□ -1.88
UBP1Q9NZI7 MIR4444-1-201ENST00000581696 74 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 MIR4444-2-201ENST00000584390 74 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AC006435.5-201ENST00000624486 112 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 Z83843.1-201ENST00000604070 3685 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
UBP1Q9NZI7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 RNU4-17P-201ENST00000365598 141 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 SNORD14D-201ENST00000384390 87 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 MIR561-201ENST00000385216 97 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 SNORA48.5-201ENST00000391143 135 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AL121890.1-201ENST00000435457 205 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AL137159.1-201ENST00000452808 512 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AC104027.1-201ENST00000521887 300 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 MIR6075-201ENST00000620782 95 ntBASIC3.29□□□□□ -1.88
UBP1Q9NZI7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.29□□□□□ -1.88
UBP1Q9NZI7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SNORA27.1-201ENST00000362604 124 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SNORA70.4-201ENST00000365509 134 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 RNU6-220P-201ENST00000390919 107 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AL355796.1-201ENST00000406706 323 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC010154.1-201ENST00000425857 269 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC016717.1-201ENST00000448918 286 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SNORD65B-201ENST00000459126 73 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 PHBP14-201ENST00000512887 367 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC025647.1-201ENST00000517879 253 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC100767.1-201ENST00000528178 123 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC008739.3-201ENST00000603262 127 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AL355297.2-201ENST00000604792 129 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
UBP1Q9NZI7 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 MIR7975-201ENST00000619350 68 ntBASIC3.28□□□□□ -1.88
UBP1Q9NZI7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
UBP1Q9NZI7 MIR208A-201ENST00000362287 71 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 Y_RNA.7-201ENST00000362352 102 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 RNU1-23P-201ENST00000363361 144 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 SNORD46.1-201ENST00000364139 104 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 RNU4-61P-201ENST00000411243 107 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AC003685.2-201ENST00000422795 395 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 MTND2P29-201ENST00000438595 412 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AL357134.1-201ENST00000445848 426 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 PRSS3P4-201ENST00000453323 162 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 snoU13.22-201ENST00000459428 104 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 RN7SL330P-201ENST00000469709 307 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AL449363.1-201ENST00000617815 186 ntBASIC3.27□□□□□ -1.89
UBP1Q9NZI7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
UBP1Q9NZI7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UBP1Q9NZI7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
UBP1Q9NZI7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.27□□□□□ -1.89
UBP1Q9NZI7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBP1Q9NZI7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms