Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MIR568-201ENST00000385036 95 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 U6atac.2-201ENST00000408644 118 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-130P-201ENST00000411112 103 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 RPEP5-201ENST00000441137 268 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 AC090255.1-201ENST00000495779 349 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 AC023141.11-201ENST00000508864 202 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 MIR449C-201ENST00000516047 92 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 AL355297.3-201ENST00000604082 446 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 AC069294.1-201ENST00000608397 350 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 BX322639.1-202ENST00000423987 2213 ntBASIC2.26□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.26-201ENST00000362539 101 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 RNU1-76P-201ENST00000362903 159 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-280P-201ENST00000364145 104 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 SNORA18.2-201ENST00000383865 132 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.526-201ENST00000384572 110 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 MIR329-1-201ENST00000385028 80 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 SNORD12B-201ENST00000410433 91 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 AC004866.1-201ENST00000411748 78 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 MIR4659A-201ENST00000580269 81 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 MZT1P2-201ENST00000604387 248 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 AC008121.3-201ENST00000618726 433 ntBASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SMARCAL1Q9NZC9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.47-201ENST00000362697 108 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-727P-201ENST00000363592 107 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.214-201ENST00000364201 112 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-806P-201ENST00000365147 105 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 MIR29B2-201ENST00000385055 81 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-220P-201ENST00000390919 107 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 ELOCP20-201ENST00000422460 345 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC034114.1-201ENST00000520293 285 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC010999.1-201ENST00000611856 324 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AL357075.2-201ENST00000614906 189 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC240442.1-201ENST00000616055 283 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 AC012640.5-201ENST00000623897 319 ntBASIC2.24□□□□□ -2.05
SMARCAL1Q9NZC9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 SNORD32B-201ENST00000364460 84 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU1-91P-201ENST00000364746 163 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 SNORA63.7-201ENST00000365579 123 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 SNORA6-201ENST00000384033 151 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-1145P-201ENST00000384246 107 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-1109P-201ENST00000391187 107 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RPL21P1-201ENST00000399532 476 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU4-53P-201ENST00000410828 140 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AC004386.2-201ENST00000441858 148 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 DYNLT3P2-201ENST00000442517 295 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AC091179.3-201ENST00000474761 144 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNY3P15-201ENST00000516297 97 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU2-44P-201ENST00000516795 194 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-897P-201ENST00000517135 105 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RNU6-586P-201ENST00000517265 104 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 RRN3P3-201ENST00000549207 578 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 MIR5006-201ENST00000583027 110 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 SNRPGP20-201ENST00000604477 205 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AL121655.1-201ENST00000605811 308 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 AC005562.2-201ENST00000618264 111 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 MTND5P6-201ENST00000422338 1798 ntBASIC2.23□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.64-201ENST00000362845 102 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.105-201ENST00000363182 111 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.179-201ENST00000363844 90 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 Y_RNA.222-201ENST00000364264 102 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 SNORD78.2-201ENST00000391076 69 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 RNU2-20P-201ENST00000410425 191 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 SDAD1P3-201ENST00000427380 333 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 MTCYBP9-201ENST00000431021 303 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AC073910.1-201ENST00000445047 438 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 FCF1P4-201ENST00000448326 183 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 AC067942.3-201ENST00000512025 362 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 MTCO2P24-201ENST00000515611 426 ntBASIC2.22□□□□□ -2.05
SMARCAL1Q9NZC9 RN7SKP49-201ENST00000516675 260 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms