Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC114982.1-201ENST00000469402 321 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 RN7SL297P-201ENST00000483161 293 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 SRIP1-201ENST00000489235 288 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 SERF1AP1-201ENST00000514575 187 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 RNU2-31P-201ENST00000516954 155 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 AC005357.1-201ENST00000588399 301 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 MIR3651-201ENST00000630427 90 ntBASIC2.64□□□□□ -1.99
RLIMQ9NVW2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RLIMQ9NVW2 RNU6-454P-201ENST00000364292 107 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 SNORD31B-201ENST00000364977 69 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 RNU6-1318P-201ENST00000365389 103 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MIR561-201ENST00000385216 97 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MIR548H3-201ENST00000408771 118 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 RNU2-54P-201ENST00000410299 190 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 RNU6-57P-201ENST00000411348 103 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 RNU7-57P-201ENST00000459540 60 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MTND1P19-201ENST00000511780 315 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 RNU6-667P-201ENST00000517186 102 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 PRELID2P1-201ENST00000552837 301 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC007179.3-201ENST00000604976 235 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC013412.1-201ENST00000610687 192 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MIR8057-201ENST00000620957 69 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 AC078938.1-201ENST00000620993 318 ntBASIC2.63□□□□□ -1.99
RLIMQ9NVW2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RLIMQ9NVW2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 MIR335-201ENST00000362173 94 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 RNU6-1266P-201ENST00000362794 105 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 SNORD56.5-201ENST00000364281 72 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 RNU6-418P-201ENST00000384035 107 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.562-201ENST00000384695 113 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AL139095.1-201ENST00000404326 391 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AL603910.2-201ENST00000407268 136 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC009963.1-201ENST00000417265 157 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AL161756.2-201ENST00000604597 246 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC096577.2-201ENST00000611455 153 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AL590240.4-201ENST00000616908 390 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 AC127459.3-201ENST00000624328 466 ntBASIC2.62□□□□□ -1.99
RLIMQ9NVW2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.62□□□□□ -1.99
RLIMQ9NVW2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.277-201ENST00000364754 102 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.518-201ENST00000384552 113 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 RNU6-1023P-201ENST00000516137 106 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 RNA5SP341-201ENST00000516261 117 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 RN7SKP57-201ENST00000517248 293 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 DEFB117-201ENST00000602356 141 ntBASIC2.61□□□□□ -1.99
RLIMQ9NVW2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
RLIMQ9NVW2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 MIR410-201ENST00000362222 80 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 Y_RNA.416-201ENST00000384014 113 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RPL23AP83-201ENST00000434984 473 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 NDUFB4P10-201ENST00000452541 359 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 AL139109.1-201ENST00000455491 297 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RN7SL499P-201ENST00000481141 276 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RNU2-12P-201ENST00000517216 168 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 RPL21P9-201ENST00000556149 474 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 AL162274.2-201ENST00000614406 332 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 U2.14-201ENST00000615943 113 ntBASIC2.6□□□□□ -1.99
RLIMQ9NVW2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RLIMQ9NVW2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.59□□□□□ -1.99
RLIMQ9NVW2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.59□□□□□ -1.99
RLIMQ9NVW2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms