Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC021443.1-201ENST00000604478 211 ntBASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 MIR432-201ENST00000606207 94 ntBASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 MIR376A2-201ENST00000636782 80 ntBASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.04□□□□□ -1.76
PRDM9Q9NQV7 ZNF720P1-201ENST00000562403 1939 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 Y_RNA.17-201ENST00000362433 111 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RNU6-438P-201ENST00000365561 103 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RNU6-1274P-201ENST00000384557 107 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MT-TI-201ENST00000387365 69 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RNA5SP225-201ENST00000410874 135 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 AC091167.1-201ENST00000492017 396 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RNA5SP112-201ENST00000515937 99 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MIR4697-201ENST00000582977 78 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MIR3138-201ENST00000585238 82 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MIR3653-201ENST00000625572 110 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MIR6830-201ENST00000636015 70 ntBASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.03□□□□□ -1.76
PRDM9Q9NQV7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.03□□□□□ -1.77
PRDM9Q9NQV7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 RNU1-14P-201ENST00000362759 152 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 RNU6-944P-201ENST00000364023 107 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 Y_RNA.621-201ENST00000411065 96 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 HMGN2P31-201ENST00000432430 273 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 RPL39P25-201ENST00000449384 154 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 SNRPGP5-201ENST00000456003 220 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 DEFB131E-201ENST00000532329 154 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 TVP23BP1-201ENST00000557500 617 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 MIR3939-201ENST00000582614 106 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 MIR6716-201ENST00000613413 80 ntBASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.02□□□□□ -1.77
PRDM9Q9NQV7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 MIR383-201ENST00000362257 73 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 DBIP2-201ENST00000419076 262 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 RN7SL385P-201ENST00000468873 276 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 Y_RNA.714-201ENST00000517065 90 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 SUMO2P16-201ENST00000519475 264 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 AL359075.3-201ENST00000613288 217 ntBASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRDM9Q9NQV7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRDM9Q9NQV7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 Y_RNA.10-201ENST00000362371 110 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 RNY3P2-201ENST00000362918 102 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 RNY1P6-201ENST00000384193 109 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 Z98742.2-201ENST00000431564 187 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 RNU6-65P-201ENST00000516332 98 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 SNORA31.21-201ENST00000517180 77 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4□□□□□ -1.77
PRDM9Q9NQV7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4□□□□□ -1.77
PRDM9Q9NQV7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 AC018630.2-201ENST00000534866 2403 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 SNORA70.2-201ENST00000364506 135 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 SNORA2.2-201ENST00000365473 135 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 U8.17-201ENST00000391292 132 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 RPL23AP46-201ENST00000438548 490 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 RNU7-164P-201ENST00000459221 62 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 AP001486.1-201ENST00000463339 476 ntBASIC3.99□□□□□ -1.77
PRDM9Q9NQV7 AC022137.1-201ENST00000483735 151 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms