Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR3169-201ENST00000578032 83 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 MIR6853-201ENST00000619642 74 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 MIR6719-201ENST00000622428 87 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTN4Q9NQC3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 RNU6-1164P-201ENST00000364428 107 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 COX6B1P1-201ENST00000415962 213 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 AC069257.2-201ENST00000441819 155 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 ABCF2P2-201ENST00000450549 296 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 SNRPGP8-201ENST00000454064 226 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 SNORA31.26-201ENST00000517250 137 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 MIR378D2-201ENST00000580636 98 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 AC012640.5-201ENST00000623897 319 ntBASIC4.91□□□□□ -1.62
RTN4Q9NQC3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.91□□□□□ -1.62
RTN4Q9NQC3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.9□□□□□ -1.62
RTN4Q9NQC3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RTN4Q9NQC3 MIR1911-201ENST00000410783 80 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 RNA5SP492-201ENST00000411330 114 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AC012671.1-201ENST00000451912 203 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 SNORD11-201ENST00000459124 84 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 RN7SL93P-201ENST00000463035 293 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AL031274.2-201ENST00000599419 203 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AC091895.1-201ENST00000624494 256 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 MIR6844-201ENST00000637122 62 ntBASIC4.9□□□□□ -1.63
RTN4Q9NQC3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTN4Q9NQC3 AC017071.1-201ENST00000564407 2204 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4Q9NQC3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.89□□□□□ -1.63
RTN4Q9NQC3 RNU6-1138P-201ENST00000365359 106 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 DYNLT3P1-201ENST00000378574 347 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 Y_RNA.568-201ENST00000384742 113 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 AL031121.1-201ENST00000406553 254 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 RNU2-70P-201ENST00000410718 179 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 PHBP16-201ENST00000446318 950 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 RNU6-561P-201ENST00000516222 102 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
RTN4Q9NQC3 AC090877.1-201ENST00000561418 344 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 MIR3667-201ENST00000581025 74 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 MIR7155-201ENST00000615925 56 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 MIR6730-201ENST00000622213 67 ntBASIC4.89□□□□□ -1.63
RTN4Q9NQC3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTN4Q9NQC3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RNU6-862P-201ENST00000362804 105 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RNU4-11P-201ENST00000365287 132 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 SNORD113-1-201ENST00000365321 69 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RNU6-597P-201ENST00000365620 102 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RNU1-148P-201ENST00000384472 162 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RPL23AP93-201ENST00000440847 484 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 RN7SL329P-201ENST00000467740 299 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 MIR6891-201ENST00000618788 93 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RTN4Q9NQC3 U6.108-201ENST00000637764 58 ntBASIC4.88□□□□□ -1.63
RTN4Q9NQC3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
RTN4Q9NQC3 Z82217.1-201ENST00000625157 8149 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 SNORD115-3-201ENST00000363100 82 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 Y_RNA.267-201ENST00000364679 109 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 RNU6-81P-201ENST00000365608 104 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 MIR659-201ENST00000384963 97 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 SNORA75.5-201ENST00000391291 81 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 RNU2-56P-201ENST00000516826 190 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 AP005019.3-201ENST00000620418 560 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 AC068870.2-201ENST00000620635 389 ntBASIC4.87□□□□□ -1.63
RTN4Q9NQC3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
RTN4Q9NQC3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4Q9NQC3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AL645927.1-201ENST00000396783 406 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AC245047.4-201ENST00000433189 144 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 RPL31P61-201ENST00000496160 376 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 RNU6-1291P-201ENST00000516591 104 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AC093331.1-201ENST00000521474 169 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AC112693.2-201ENST00000556538 232 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AC069114.2-201ENST00000604699 304 ntBASIC4.86□□□□□ -1.63
RTN4Q9NQC3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.86□□□□□ -1.63
RTN4Q9NQC3 AC245060.5-201ENST00000610778 3293 ntBASIC4.85□□□□□ -1.63
RTN4Q9NQC3 RNA5SP479-201ENST00000364858 117 ntBASIC4.85□□□□□ -1.63
RTN4Q9NQC3 SNORA71.2-201ENST00000364941 134 ntBASIC4.85□□□□□ -1.63
RTN4Q9NQC3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.85□□□□□ -1.63
RTN4Q9NQC3 AL049830.1-201ENST00000468034 425 ntBASIC4.85□□□□□ -1.63
RTN4Q9NQC3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.85□□□□□ -1.63
RTN4Q9NQC3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTN4Q9NQC3 SNORA25.7-201ENST00000364375 127 ntBASIC4.84□□□□□ -1.63
RTN4Q9NQC3 SNORA37-201ENST00000384504 129 ntBASIC4.84□□□□□ -1.63
RTN4Q9NQC3 RNA5SP465-201ENST00000391195 109 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms