Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TRBV12-1-201ENST00000479785 344 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU6-408P-201ENST00000515910 100 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU6-1098P-201ENST00000516772 96 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 RN7SKP40-201ENST00000517211 242 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 RRN3P3-201ENST00000549207 578 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 MYL12BP1-201ENST00000569826 507 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 MIR4635-201ENST00000583759 79 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU6-626P-201ENST00000363354 107 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 Y_RNA.143-201ENST00000363520 106 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 AL139095.1-201ENST00000404326 391 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 RNA5SP475-201ENST00000410568 110 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 TOMM22P2-201ENST00000430735 237 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 AC005002.2-201ENST00000438228 269 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 IPO7P1-201ENST00000442031 636 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 SRIP1-201ENST00000489235 288 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 AC008413.1-201ENST00000511864 177 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 AP003733.2-201ENST00000529409 171 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 MIR3149-201ENST00000584629 83 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 AC005176.2-201ENST00000596933 147 ntBASIC2.94□□□□□ -1.94
VTA1Q9NP79 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.94□□□□□ -1.94
VTA1Q9NP79 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VTA1Q9NP79 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VTA1Q9NP79 Y_RNA.401-201ENST00000383965 117 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR568-201ENST00000385036 95 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR27B-201ENST00000385129 97 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR549A-201ENST00000385268 96 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR1302-6-201ENST00000408466 90 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR1283-1-201ENST00000408494 87 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 AC004866.1-201ENST00000411748 78 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 ELOCP21-201ENST00000412558 336 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.93□□□□□ -1.94
VTA1Q9NP79 RPL23AP36-201ENST00000413895 458 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 AC009963.1-201ENST00000417265 157 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.93□□□□□ -1.94
VTA1Q9NP79 SEPT14P8-201ENST00000508026 178 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 RNU2-34P-201ENST00000516534 121 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 RNU6-56P-201ENST00000516986 93 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR4300-201ENST00000581016 96 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR4503-201ENST00000582187 83 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 MIR4753-201ENST00000585119 83 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 SNORD113-5-201ENST00000607261 78 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 AC011476.5-201ENST00000615594 130 ntBASIC2.93□□□□□ -1.94
VTA1Q9NP79 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.93□□□□□ -1.94
VTA1Q9NP79 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 SNORD81.1-201ENST00000363064 77 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 RNU6-702P-201ENST00000364982 107 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 RNU6-20P-201ENST00000384106 107 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 RAB28P5-201ENST00000427490 651 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.92□□□□□ -1.94
VTA1Q9NP79 AC104389.3-201ENST00000445629 235 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.92□□□□□ -1.94
VTA1Q9NP79 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.92□□□□□ -1.94
VTA1Q9NP79 RNA5SP320-201ENST00000516263 124 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 RNA5SP24-201ENST00000516478 95 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 SNORD53-201ENST00000579969 78 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 AC023043.3-201ENST00000593113 385 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 AL357075.2-201ENST00000614906 189 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 U4.3-201ENST00000621047 82 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 AC064859.1-201ENST00000624741 174 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 MIR3674-201ENST00000636576 68 ntBASIC2.92□□□□□ -1.94
VTA1Q9NP79 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
VTA1Q9NP79 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VTA1Q9NP79 RNU6-727P-201ENST00000363592 107 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 RNU6-438P-201ENST00000365561 103 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 Y_RNA.415-201ENST00000384012 112 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 SNORA70B-201ENST00000384210 135 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 Y_RNA.570-201ENST00000384750 101 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 SUMO1P2-201ENST00000452524 304 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 AC011373.1-201ENST00000607270 237 ntBASIC2.91□□□□□ -1.94
VTA1Q9NP79 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.91□□□□□ -1.94
VTA1Q9NP79 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VTA1Q9NP79 MAPK10-266ENST00000641066 6555 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNU4-90P-201ENST00000362773 141 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNU6-961P-201ENST00000363893 105 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 SNORD56.5-201ENST00000364281 72 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNU6-1305P-201ENST00000364353 104 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNA5SP125-201ENST00000364843 120 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 SNORA72.2-201ENST00000365028 127 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VTA1Q9NP79 MIR1261-201ENST00000408659 82 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 Y_RNA.618-201ENST00000410949 107 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
VTA1Q9NP79 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 MTND4LP30-201ENST00000454092 297 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 AC016925.1-201ENST00000458303 298 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNU1-41P-201ENST00000516161 162 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 RNU1-48P-201ENST00000516400 162 ntBASIC2.9□□□□□ -1.95
VTA1Q9NP79 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 299.9 ms