Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 MIR548B-201ENST00000385247 97 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 RNU6-57P-201ENST00000411348 103 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 UQCRBP2-201ENST00000447827 297 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 RNU6-498P-201ENST00000459468 107 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 RN7SKP49-201ENST00000516675 260 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 AK6P2-201ENST00000549020 471 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 U2.1-201ENST00000618978 145 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 AC091925.1-201ENST00000623204 462 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 AL159152.1-201ENST00000635019 2587 ntBASIC2.42□□□□□ -2.02
ARFGAP3Q9NP61 AC245060.5-201ENST00000610778 3293 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 U3.8-201ENST00000363675 217 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 CHEK2P4-201ENST00000450340 246 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 RNU6-717P-201ENST00000459076 104 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 RNU6-107P-201ENST00000516643 102 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 RNU6-856P-201ENST00000516959 98 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 AC092447.9-201ENST00000603395 144 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 AC083806.3-201ENST00000614016 455 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 AL357075.2-201ENST00000614906 189 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 snoZ196.1-201ENST00000625269 89 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.41□□□□□ -2.02
ARFGAP3Q9NP61 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ARFGAP3Q9NP61 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
ARFGAP3Q9NP61 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 SNORD42.2-201ENST00000365570 69 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.394-201ENST00000383942 103 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 AL359511.1-201ENST00000402970 211 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 NDUFB4P10-201ENST00000452541 359 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 CYCSP23-201ENST00000519781 313 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 AC021269.2-201ENST00000532318 330 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 AC006600.1-201ENST00000572529 153 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 uc_338.22-201ENST00000622722 187 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 MIR4272-201ENST00000635924 64 ntBASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.4□□□□□ -2.03
ARFGAP3Q9NP61 ZNF72P-201ENST00000425869 1908 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 RNA5SP138-201ENST00000365098 114 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.395-201ENST00000383945 109 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 SNORD12B-201ENST00000410433 91 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 RPS20P15-201ENST00000412792 311 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AC018865.2-201ENST00000423631 129 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.639-201ENST00000458981 102 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 RN7SL636P-201ENST00000497504 294 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AC008413.1-201ENST00000511864 177 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AP002770.2-201ENST00000543613 532 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AL442163.3-201ENST00000554110 156 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 AL162373.1-201ENST00000620433 407 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ARFGAP3Q9NP61 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 RNA5SP276-201ENST00000362580 94 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.39-201ENST00000362620 98 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.112-201ENST00000363250 102 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 RNU1-115P-201ENST00000365329 160 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 RNA5SP338-201ENST00000410495 85 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AC096920.1-201ENST00000423991 241 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AL137792.2-201ENST00000443484 235 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 PCNPP5-201ENST00000452246 481 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AC234781.5-201ENST00000508429 271 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-911P-201ENST00000516523 104 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 SUMO2P18-201ENST00000518873 252 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 SNRPGP18-201ENST00000553000 214 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 VN1R91P-201ENST00000594377 169 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 AC006001.4-201ENST00000622243 395 ntBASIC2.38□□□□□ -2.03
ARFGAP3Q9NP61 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 Y_RNA.445-201ENST00000384168 102 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 SNORA67.4-201ENST00000384688 142 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-308P-201ENST00000390957 107 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 MTND2P29-201ENST00000438595 412 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AC007677.1-201ENST00000445757 515 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 ATP5J2P3-201ENST00000451550 258 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 SNORA40.9-201ENST00000515895 93 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 RNU6-1041P-201ENST00000516254 102 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 RNU1-40P-201ENST00000516816 164 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 RNU1-97P-201ENST00000516872 164 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AC005786.1-201ENST00000588553 154 ntBASIC2.37□□□□□ -2.03
ARFGAP3Q9NP61 AC006157.1-201ENST00000611750 366 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms