Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 SNORA63.1-201ENST00000362493 131 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.357-201ENST00000365487 109 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 RNU6-748P-201ENST00000384648 107 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 RNA5SP201-201ENST00000410316 124 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 RN7SL75P-201ENST00000461926 281 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 RPS27AP9-201ENST00000477681 438 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.797-201ENST00000515977 94 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AC074050.1-201ENST00000563247 211 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AL356575.1-201ENST00000603008 283 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 SNORD11B-201ENST00000607707 90 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 AC006111.3-201ENST00000622137 383 ntBASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.17□□□□□ -1.9
PCDH18Q9HCL0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 U3.9-201ENST00000363823 204 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 RNU6-81P-201ENST00000365608 104 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 Y_RNA.488-201ENST00000384403 102 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 MIR23B-201ENST00000384832 97 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 RPL39P40-201ENST00000445481 146 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 AL031183.1-201ENST00000457667 207 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 YPEL5P2-201ENST00000605553 359 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
PCDH18Q9HCL0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDH18Q9HCL0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PCDH18Q9HCL0 RNU6-1290P-201ENST00000362957 109 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORD115-30-201ENST00000364117 82 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 Y_RNA.215-201ENST00000364204 112 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 snoU2_19.4-201ENST00000364329 80 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 Y_RNA.343-201ENST00000365354 112 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORD50.2-201ENST00000365465 70 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 RNU6-1081P-201ENST00000384537 107 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORA20-201ENST00000384662 132 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 CYCSP48-201ENST00000417124 323 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AL441985.1-201ENST00000457727 251 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 RN7SL807P-201ENST00000470923 297 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORA31.1-201ENST00000515993 133 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 MIR449C-201ENST00000516047 92 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 SNORA31.5-201ENST00000516190 133 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC100767.1-201ENST00000528178 123 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC090616.3-201ENST00000582184 217 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC069294.1-201ENST00000608397 350 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 MTND1P7-201ENST00000632801 297 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 AC010329.5-201ENST00000623497 2174 ntBASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PCDH18Q9HCL0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 Y_RNA.24-201ENST00000362508 103 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 RNU6-655P-201ENST00000362858 107 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 Y_RNA.400-201ENST00000383963 111 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 RNU6-1117P-201ENST00000384525 104 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 RNU6-1248P-201ENST00000391096 64 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 RNU6-855P-201ENST00000410395 104 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 Z98742.2-201ENST00000431564 187 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AL162725.1-201ENST00000435405 301 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AC006445.1-201ENST00000491925 405 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 RNU6-453P-201ENST00000516819 85 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AC025281.1-201ENST00000567026 265 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 MIR92B-201ENST00000607575 96 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AL365222.1-201ENST00000614661 98 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AC068205.3-201ENST00000636385 468 ntBASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PCDH18Q9HCL0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH18Q9HCL0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH18Q9HCL0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDH18Q9HCL0 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
PCDH18Q9HCL0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.13□□□□□ -1.91
PCDH18Q9HCL0 RNU4-84P-201ENST00000364200 139 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms