Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RNU6-454P-201ENST00000364292 107 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU4-10P-201ENST00000364383 140 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU6-312P-201ENST00000364629 107 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 SNORD50B-201ENST00000364995 70 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU6-1248P-201ENST00000391096 64 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC004866.1-201ENST00000411748 78 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC027124.2-201ENST00000428249 105 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 Z98742.2-201ENST00000431564 187 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RPL36AP48-201ENST00000485521 314 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 RNU6-313P-201ENST00000516317 112 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC068657.1-201ENST00000520807 306 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 MIR3136-201ENST00000583498 78 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 AC100821.1-201ENST00000523153 2479 ntBASIC3.29□□□□□ -1.88
RNF38Q9H0F5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.23-201ENST00000362496 106 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 SNORD114-19-201ENST00000363072 75 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 RNU6-529P-201ENST00000363383 104 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 RPL23AP58-201ENST00000440453 469 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AP001486.1-201ENST00000463339 476 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 Y_RNA.797-201ENST00000515977 94 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 RNU2-12P-201ENST00000517216 168 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AC100767.1-201ENST00000528178 123 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 MIR4765-201ENST00000585007 77 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 AL365222.1-201ENST00000614661 98 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 MIR7515-201ENST00000637837 67 ntBASIC3.28□□□□□ -1.88
RNF38Q9H0F5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF38Q9H0F5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.28□□□□□ -1.89
RNF38Q9H0F5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 AC134026.1-201ENST00000623249 2239 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.75-201ENST00000362927 97 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 RNU6-1048P-201ENST00000364054 107 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 RNU6-1264P-201ENST00000383891 107 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 SNORA22C-201ENST00000384614 134 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 AL135790.2-201ENST00000437701 267 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 AC112771.1-201ENST00000463581 102 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 RNU6-479P-201ENST00000516348 105 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.27□□□□□ -1.89
RNF38Q9H0F5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF38Q9H0F5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 RNU6-1010P-201ENST00000362757 107 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 SNORA54-201ENST00000384281 123 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.586-201ENST00000391146 98 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 SNORA26.5-201ENST00000391215 123 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC004386.2-201ENST00000441858 148 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AL049873.1-201ENST00000480540 376 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 DEFB131C-201ENST00000528817 165 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC090616.3-201ENST00000582184 217 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC005520.5-201ENST00000613926 164 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
RNF38Q9H0F5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
RNF38Q9H0F5 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF38Q9H0F5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF38Q9H0F5 AC068700.1-201ENST00000565862 3754 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.121-201ENST00000363309 113 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 RNU6-801P-201ENST00000364087 105 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 Y_RNA.293-201ENST00000364908 93 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 SNORA18.2-201ENST00000383865 132 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 SNORD15B-201ENST00000384714 146 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 RNU6-381P-201ENST00000391259 108 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 AL031003.1-201ENST00000404229 172 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 CR769767.1-201ENST00000436337 346 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 AC146507.2-201ENST00000460608 476 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 AC079598.5-201ENST00000547460 117 ntBASIC3.25□□□□□ -1.89
RNF38Q9H0F5 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms