Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
BHLHE41Q9C0J9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 SNORA14A-201ENST00000364773 135 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-1325P-201ENST00000364905 105 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-44P-201ENST00000384045 107 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 RPS29P31-201ENST00000446147 164 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 MIR378D2-201ENST00000580636 98 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 AC023043.3-201ENST00000593113 385 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 MIR6075-201ENST00000620782 95 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 AP000553.6-201ENST00000641242 118 ntBASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
BHLHE41Q9C0J9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-915P-201ENST00000364943 103 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 MIR200C-201ENST00000384980 68 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 RPS27P22-201ENST00000478056 241 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 AC008011.1-201ENST00000545989 227 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 MIR4738-201ENST00000579134 87 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 MIR4444-1-201ENST00000581696 74 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 MIR4444-2-201ENST00000584390 74 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 AC006435.5-201ENST00000624486 112 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 AC110079.1-202ENST00000635213 138 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 CENPCP1-201ENST00000533085 2578 ntBASIC3.48□□□□□ -1.85
BHLHE41Q9C0J9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-674P-201ENST00000363831 107 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-1056P-201ENST00000383996 107 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-418P-201ENST00000384035 107 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-1235P-201ENST00000384559 107 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RN7SKP101-201ENST00000411376 320 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 CYCSP49-201ENST00000420810 319 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RPS29P7-201ENST00000439662 171 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 SNRPGP8-201ENST00000454064 226 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 snoU13.22-201ENST00000459428 104 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RNU6-498P-201ENST00000459468 107 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 RN7SKP179-201ENST00000516126 217 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC025647.1-201ENST00000517879 253 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC120024.3-201ENST00000603167 156 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC008739.3-201ENST00000603262 127 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 U6.98-201ENST00000637157 84 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 AC009487.4-201ENST00000624969 3585 ntBASIC3.47□□□□□ -1.85
BHLHE41Q9C0J9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 Z82209.1-201ENST00000422141 2135 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-834P-201ENST00000362367 110 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNA5SP42-201ENST00000364278 115 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-597P-201ENST00000365620 102 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNA5SP511-201ENST00000410487 115 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 SNORA57.3-201ENST00000411095 141 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AC245047.4-201ENST00000433189 144 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AC016925.1-201ENST00000458303 298 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-965P-201ENST00000516721 96 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-579P-201ENST00000516879 102 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AC087499.8-201ENST00000578406 226 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AL049861.1-201ENST00000603130 150 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 AC091564.4-201ENST00000533934 2194 ntBASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BHLHE41Q9C0J9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-1082P-201ENST00000364574 107 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 MIR30B-201ENST00000384850 88 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 MIR1278-201ENST00000408753 81 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 DBIP2-201ENST00000419076 262 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AC023449.1-201ENST00000454464 154 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 RNU7-170P-201ENST00000459303 61 ntBASIC3.45□□□□□ -1.86
BHLHE41Q9C0J9 AC010531.2-201ENST00000465012 153 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms