Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIR1185-2-201ENST00000408687 86 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 AL035423.1-201ENST00000420331 213 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 HMGN2P16-201ENST00000456802 261 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 RNU7-171P-201ENST00000459581 62 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 RNU6-237P-201ENST00000515985 71 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 SCARNA23-201ENST00000516060 130 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 RNU6-126P-201ENST00000516685 103 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 MIR3129-201ENST00000581095 76 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 AC012493.2-201ENST00000595083 291 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 HSPE1P7-201ENST00000604681 321 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 MIR7154-201ENST00000620673 73 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 MIR8057-201ENST00000620957 69 ntBASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNTNAP3Q9BZ76 AL133412.1-201ENST00000380194 2992 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AL356292.1-201ENST00000283110 373 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 RNU4-15P-201ENST00000362613 141 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 Y_RNA.213-201ENST00000364178 111 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 Y_RNA.486-201ENST00000384398 107 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 MIR147B-201ENST00000390185 80 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 Z74021.1-201ENST00000423610 407 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 RNU6-504P-201ENST00000516568 104 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AC022254.1-201ENST00000567857 235 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 RPL23AP91-201ENST00000569211 455 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 MIR5588-201ENST00000581890 63 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AL929325.1-201ENST00000603096 117 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 Pinc.1-201ENST00000616452 154 ntBASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTNAP3Q9BZ76 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 AL353689.1-201ENST00000438895 199 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 RNU7-149P-201ENST00000516739 59 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 SCARNA15-202ENST00000516881 127 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 AC100770.1-201ENST00000532310 322 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 MIR4662B-201ENST00000579498 81 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 AC006386.2-201ENST00000624491 75 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 AC012005.1-201ENST00000624575 75 ntBASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTNAP3Q9BZ76 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 Y_RNA.265-201ENST00000364677 108 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 MIR562-201ENST00000384894 95 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AL451046.2-201ENST00000403074 277 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RPL23AP48-201ENST00000406913 488 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 EIF4EP4-201ENST00000424916 578 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AC018634.1-201ENST00000437554 401 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RNU7-23P-201ENST00000459465 62 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RPL23AP67-201ENST00000465341 474 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RPL27AP5-201ENST00000469428 449 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AC093663.1-201ENST00000497190 394 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 VWA8P1-201ENST00000510889 176 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 RNU6-1149P-201ENST00000516810 97 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 DEFB131E-201ENST00000532329 154 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AC015912.2-201ENST00000571053 181 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AC002546.1-201ENST00000588041 2504 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 MAPK10-372ENST00000641954 3413 ntBASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CNTNAP3Q9BZ76 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 RNY3P2-201ENST00000362918 102 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 SNORA38.1-201ENST00000364172 131 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 HSPE1P26-201ENST00000405341 275 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 AC004552.1-201ENST00000419089 348 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 AC023449.1-201ENST00000454464 154 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 RPS26P3-201ENST00000470205 348 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 AC090543.2-201ENST00000483963 348 ntBASIC3.91□□□□□ -1.78
CNTNAP3Q9BZ76 AC004057.1-201ENST00000485827 348 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms