Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 AC058791.1-201ENST00000608412 3198 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-969P-201ENST00000383900 105 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 RNA5SP252-201ENST00000391131 119 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA48.5-201ENST00000391143 135 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA12-201ENST00000391162 147 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 AL353705.1-201ENST00000433468 480 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 AC099778.2-201ENST00000610904 211 ntBASIC3.74□□□□□ -1.81
ZKSCAN3Q9BRR0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORD114-7-201ENST00000362520 77 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-144P-201ENST00000383951 107 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA9-201ENST00000384215 133 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR491-201ENST00000384877 84 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 AC006445.1-201ENST00000491925 405 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 SCARNA8-201ENST00000515924 131 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 SNORA25.12-201ENST00000516202 82 ntBASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ZKSCAN3Q9BRR0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-199P-201ENST00000362954 107 ntBASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 RNU6-453P-201ENST00000516819 85 ntBASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR4724-201ENST00000579485 89 ntBASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 MIR8057-201ENST00000620957 69 ntBASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZKSCAN3Q9BRR0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
ZKSCAN3Q9BRR0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR367-201ENST00000362299 68 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORD32B-201ENST00000364460 84 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR29B2-201ENST00000385055 81 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AP000567.1-201ENST00000406413 156 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR1185-2-201ENST00000408687 86 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU4-47P-201ENST00000410876 114 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AL121914.1-201ENST00000450188 156 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AL137159.1-201ENST00000452808 512 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 AC245047.8-201ENST00000456455 284 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU1-143P-201ENST00000516296 146 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR5004-201ENST00000579078 107 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 U1.23-201ENST00000610293 146 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU1-68P-201ENST00000615382 146 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 U1.39-201ENST00000621562 146 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR3658-201ENST00000636291 56 ntBASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.71□□□□□ -1.82
ZKSCAN3Q9BRR0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 RNA5SP205-201ENST00000364653 136 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORD67-201ENST00000390833 111 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 AC006461.1-201ENST00000412637 326 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 AC097463.2-201ENST00000421074 142 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 MTND4LP9-201ENST00000427694 174 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 HMGN2P9-201ENST00000476875 229 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 AC104027.1-201ENST00000521887 300 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 AC008739.2-201ENST00000597006 317 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 AL159152.1-201ENST00000635019 2587 ntBASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZKSCAN3Q9BRR0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 SNORA51.4-201ENST00000364993 124 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-643P-201ENST00000384018 107 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR15B-201ENST00000385045 98 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 MIR767-201ENST00000390228 109 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 RNU6-1228P-201ENST00000391014 107 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 EIF4EP4-201ENST00000424916 578 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 HSPE1P21-201ENST00000438283 308 ntBASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
ZKSCAN3Q9BRR0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 284.5 ms