Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AP003122.5-201ENST00000527668 3766 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-1298P-201ENST00000362456 101 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-884P-201ENST00000363889 107 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-454P-201ENST00000364292 107 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AC009963.1-201ENST00000417265 157 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 CYCSP49-201ENST00000420810 319 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AC092047.1-201ENST00000424997 240 ntBASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
CDK5RAP1Q96SZ6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.121-201ENST00000363309 113 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-324P-201ENST00000363957 106 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-429P-201ENST00000384582 108 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU2-54P-201ENST00000410299 190 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AC244670.1-201ENST00000436879 112 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AC005840.1-201ENST00000498412 377 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AC016632.1-201ENST00000503994 196 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 PDCD5P2-201ENST00000507570 312 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU4-57P-201ENST00000515980 135 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-436P-201ENST00000516171 114 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
CDK5RAP1Q96SZ6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-137P-201ENST00000363680 108 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.415-201ENST00000384012 112 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-578P-201ENST00000390980 103 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-460P-201ENST00000391158 108 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR1289-1-201ENST00000408836 144 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RPL30P13-201ENST00000418873 348 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR6134-201ENST00000617606 109 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CDK5RAP1Q96SZ6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDK5RAP1Q96SZ6 ZNF702P-202ENST00000434269 1966 ntBASIC3.09□□□□□ -1.92
CDK5RAP1Q96SZ6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC009487.2-201ENST00000420969 6821 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 RNA5SP139-201ENST00000364340 117 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-217P-201ENST00000384164 104 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-793P-201ENST00000384233 104 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC096649.2-201ENST00000416186 393 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 EBAG9P1-201ENST00000418955 543 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC012306.1-201ENST00000423267 114 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC019205.3-201ENST00000424573 156 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC107083.1-201ENST00000439643 279 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 MTATP6P7-201ENST00000453315 681 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU7-107P-201ENST00000459121 61 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-561P-201ENST00000516222 102 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 LARP7P3-201ENST00000579888 337 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR4431-201ENST00000579990 94 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR4744-201ENST00000581563 82 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR3674-201ENST00000636576 68 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 AC099654.7-201ENST00000635788 2127 ntBASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDK5RAP1Q96SZ6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 Y_RNA.24-201ENST00000362508 103 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 Y_RNA.293-201ENST00000364908 93 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-80P-201ENST00000384195 107 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 MT-TT-201ENST00000387460 66 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR513C-201ENST00000401352 84 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 U3.40-201ENST00000408706 208 ntBASIC3.07□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms