Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AL137792.2-201ENST00000443484 235 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AL035666.1-201ENST00000446195 348 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 RNU6-976P-201ENST00000516086 111 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 RNU6-548P-201ENST00000517083 115 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AC022616.8-201ENST00000533569 253 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.34□□□□□ -2.03
SIN3AQ96ST3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.34□□□□□ -2.03
SIN3AQ96ST3 AL132822.1-201ENST00000617063 513 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 MIR1248-201ENST00000629190 106 ntBASIC2.34□□□□□ -2.03
SIN3AQ96ST3 BX322639.1-202ENST00000423987 2213 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU6-137P-201ENST00000363680 108 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 SNORA38-201ENST00000363946 132 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU6-457P-201ENST00000363999 107 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU6-694P-201ENST00000364071 147 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU4-76P-201ENST00000364509 141 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNA5SP363-201ENST00000365072 115 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 SNORA25B-201ENST00000365507 128 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 SNORA18.2-201ENST00000383865 132 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU6-474P-201ENST00000384243 107 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 MIR561-201ENST00000385216 97 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RNU6-159P-201ENST00000391080 106 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 RN7SKP101-201ENST00000411376 320 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 AC004866.1-201ENST00000411748 78 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.33□□□□□ -2.04
SIN3AQ96ST3 U8.22-201ENST00000459141 133 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.33□□□□□ -2.04
SIN3AQ96ST3 AC107032.1-201ENST00000485945 480 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.701-201ENST00000516812 110 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 UBL5P4-201ENST00000562584 236 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 MIR4303-201ENST00000581299 66 ntBASIC2.33□□□□□ -2.04
SIN3AQ96ST3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SIN3AQ96ST3 ZNF204P-201ENST00000416749 2397 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNU1-76P-201ENST00000362903 159 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.112-201ENST00000363250 102 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.364-201ENST00000365532 101 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNU6-26P-201ENST00000383985 107 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 MIR10B-201ENST00000385011 110 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNU1-139P-201ENST00000391307 165 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.32□□□□□ -2.04
SIN3AQ96ST3 CHEK2P4-201ENST00000450340 246 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNU6-1153P-201ENST00000516760 105 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 RNA5SP54-201ENST00000516951 92 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.32□□□□□ -2.04
SIN3AQ96ST3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.32□□□□□ -2.04
SIN3AQ96ST3 AL645939.4-201ENST00000604495 135 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 AC005562.2-201ENST00000618264 111 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 AC138305.3-201ENST00000624988 240 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.32□□□□□ -2.04
SIN3AQ96ST3 MTND5P16-201ENST00000460269 1703 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-873P-201ENST00000363833 107 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNY3P11-201ENST00000364153 102 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-234P-201ENST00000365229 104 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-541P-201ENST00000384709 110 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 MTND1P14-201ENST00000427400 950 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 MTCO2P12-201ENST00000427426 682 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 USP9YP16-201ENST00000430287 407 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AC099799.1-201ENST00000439809 192 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 MTCO3P8-201ENST00000453691 755 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 USP9YP23-201ENST00000455085 407 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-1114P-201ENST00000516022 107 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU6-667P-201ENST00000517186 102 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AC026470.2-201ENST00000561492 181 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 AC090617.3-201ENST00000573670 475 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 MIR502-201ENST00000606349 86 ntBASIC2.31□□□□□ -2.04
SIN3AQ96ST3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SIN3AQ96ST3 RNU4-42P-201ENST00000364738 142 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 RNU1-148P-201ENST00000384472 162 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 MIR625-201ENST00000385047 85 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 RNU6-308P-201ENST00000390957 107 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 PMCHL1-202ENST00000423102 261 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.3□□□□□ -2.04
SIN3AQ96ST3 EIF1P2-201ENST00000428233 350 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC009238.1-201ENST00000442165 424 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC009237.6-201ENST00000446969 424 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 RNU7-87P-201ENST00000459343 62 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC132942.1-201ENST00000486753 483 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC108210.2-201ENST00000503681 201 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.3□□□□□ -2.04
SIN3AQ96ST3 ATP5EP1-201ENST00000510257 156 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.3□□□□□ -2.04
SIN3AQ96ST3 SNORD116.3-201ENST00000517176 78 ntBASIC2.3□□□□□ -2.04
SIN3AQ96ST3 AC034114.1-201ENST00000520293 285 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms