Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.59□□□□□ -1.99
SNX18Q96RF0 AC141273.2-201ENST00000618989 130 ntBASIC2.59□□□□□ -1.99
SNX18Q96RF0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.59□□□□□ -1.99
SNX18Q96RF0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.59□□□□□ -1.99
SNX18Q96RF0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNX18Q96RF0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
SNX18Q96RF0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.58□□□□□ -2
SNX18Q96RF0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SNX18Q96RF0 AL161431.1-201ENST00000618966 4205 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
SNX18Q96RF0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.58□□□□□ -2
SNX18Q96RF0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SNX18Q96RF0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
SNX18Q96RF0 Y_RNA.20-201ENST00000362479 113 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 SNORD87-201ENST00000364849 89 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 RNU6-338P-201ENST00000383888 105 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 Y_RNA.539-201ENST00000384635 107 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.58□□□□□ -2
SNX18Q96RF0 AC023141.11-201ENST00000508864 202 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 RNU6-107P-201ENST00000516643 102 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 RNU1-117P-201ENST00000517041 158 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 RNU6-586P-201ENST00000517265 104 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 AC008749.1-201ENST00000597650 306 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 AC006001.4-201ENST00000622243 395 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 AC127459.3-201ENST00000624328 466 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
SNX18Q96RF0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SNX18Q96RF0 Y_RNA.65-201ENST00000362846 100 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 Y_RNA.515-201ENST00000384535 112 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 Y_RNA.569-201ENST00000384749 103 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 SNORA53-201ENST00000391141 249 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AL390729.2-201ENST00000416137 156 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.57□□□□□ -2
SNX18Q96RF0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.57□□□□□ -2
SNX18Q96RF0 AC009237.7-201ENST00000447357 229 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC090515.1-201ENST00000465295 476 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 UBE2DNL-203ENST00000474922 222 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC083906.5-201ENST00000503722 328 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.57□□□□□ -2
SNX18Q96RF0 RNU6-966P-201ENST00000516479 104 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 RNU2-31P-201ENST00000516954 155 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AP002001.1-203ENST00000534002 267 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
SNX18Q96RF0 MIR3605-201ENST00000583214 100 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 SNORD11B-201ENST00000607707 90 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC004467.1-201ENST00000615678 330 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 U2.14-201ENST00000615943 113 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AC091932.3-201ENST00000624223 323 ntBASIC2.57□□□□□ -2
SNX18Q96RF0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.57□□□□□ -2
SNX18Q96RF0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.56□□□□□ -2
SNX18Q96RF0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.56□□□□□ -2
SNX18Q96RF0 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 SNORD32B-201ENST00000364460 84 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 Y_RNA.446-201ENST00000384178 104 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 Y_RNA.510-201ENST00000384511 114 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 RPL23AP36-201ENST00000413895 458 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.56□□□□□ -2
SNX18Q96RF0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.56□□□□□ -2
SNX18Q96RF0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
SNX18Q96RF0 Z98949.2-201ENST00000440996 144 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
SNX18Q96RF0 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.56□□□□□ -2
SNX18Q96RF0 AC022441.3-201ENST00000605737 136 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 AL442067.1-201ENST00000613261 223 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.56□□□□□ -2
SNX18Q96RF0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
SNX18Q96RF0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
SNX18Q96RF0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.56□□□□□ -2
SNX18Q96RF0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.56□□□□□ -2
SNX18Q96RF0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
SNX18Q96RF0 RNU6-944P-201ENST00000364023 107 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 RNU6-326P-201ENST00000365480 107 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 Y_RNA.383-201ENST00000383855 97 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AL513477.1-202ENST00000417061 214 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 POLR2KP2-201ENST00000438155 177 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 MRPS10P1-201ENST00000448483 130 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.55□□□□□ -2
SNX18Q96RF0 AC080013.2-201ENST00000460866 323 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 CKS1BP2-201ENST00000497342 240 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 MIR449C-201ENST00000516047 92 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.55□□□□□ -2
SNX18Q96RF0 MIR4513-201ENST00000581077 86 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AL109918.3-201ENST00000603072 338 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AC037487.3-201ENST00000606668 112 ntBASIC2.55□□□□□ -2
SNX18Q96RF0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.55□□□□□ -2
SNX18Q96RF0 MIR5739-201ENST00000619803 80 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms