Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 FTH1P15-201ENST00000406984 280 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 AC007064.1-201ENST00000412238 351 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 AL365496.1-201ENST00000426885 215 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 CYCSP4-201ENST00000429682 331 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 Z75741.1-201ENST00000446793 314 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 MLLT10P2-201ENST00000506434 249 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 Vault.1-201ENST00000516474 102 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 RNU6-1018P-201ENST00000516577 106 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 RNU4-60P-201ENST00000517239 135 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 AC105245.1-201ENST00000581934 244 ntBASIC4.33□□□□□ -1.72
TRIM47Q96LD4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.33□□□□□ -1.72
TRIM47Q96LD4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TRIM47Q96LD4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.33□□□□□ -1.72
TRIM47Q96LD4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.124-201ENST00000363339 93 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 RNU6-1323P-201ENST00000384025 107 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 RNA5SP120-201ENST00000410900 112 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 AC125238.1-201ENST00000448842 249 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 RPL23AP94-201ENST00000512518 302 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 AC022254.1-201ENST00000567857 235 ntBASIC4.32□□□□□ -1.72
TRIM47Q96LD4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM47Q96LD4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 RNA5SP322-201ENST00000363617 119 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 SNORA38.1-201ENST00000364172 131 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.437-201ENST00000384113 113 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 AL353689.1-201ENST00000438895 199 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 RNU6-113P-201ENST00000516653 101 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 AC084364.2-201ENST00000546924 395 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 MED28P6-201ENST00000558776 231 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 MIR4666B-201ENST00000578142 81 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 SNORD98-201ENST00000636377 67 ntBASIC4.31□□□□□ -1.72
TRIM47Q96LD4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM47Q96LD4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 RNU6-414P-201ENST00000363705 104 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 Y_RNA.198-201ENST00000364013 98 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 RNU1-33P-201ENST00000364249 162 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 SNORD77.4-201ENST00000516158 81 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 RNU6-1337P-201ENST00000516525 95 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 RNU7-116P-201ENST00000516940 62 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 AL365205.2-201ENST00000594586 68 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 MIR6134-201ENST00000617606 109 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 MIR6852-201ENST00000621699 66 ntBASIC4.3□□□□□ -1.72
TRIM47Q96LD4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM47Q96LD4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 SNORD9-201ENST00000362566 104 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 RNU6-1240P-201ENST00000365155 104 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 RNU6-979P-201ENST00000383896 107 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 AC005326.1-201ENST00000429197 123 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 AC020914.4-201ENST00000597690 277 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 YPEL5P2-201ENST00000605553 359 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 MIR8057-201ENST00000620957 69 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 AC018692.3-201ENST00000623929 123 ntBASIC4.29□□□□□ -1.72
TRIM47Q96LD4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM47Q96LD4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 SNORA4.2-201ENST00000365313 147 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 AC027124.2-201ENST00000428249 105 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 AC011406.1-201ENST00000512440 370 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 AC007751.1-201ENST00000529260 376 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 MIR5588-201ENST00000581890 63 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 MIR3124-201ENST00000582636 67 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 AC005562.2-201ENST00000618264 111 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 AC006504.1-201ENST00000562493 3666 ntBASIC4.28□□□□□ -1.72
TRIM47Q96LD4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM47Q96LD4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms