Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU1-148P-201ENST00000384472 162 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-130P-201ENST00000411112 103 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 ATP5EP1-201ENST00000510257 156 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-408P-201ENST00000515910 100 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-897P-201ENST00000517135 105 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 AL117187.1-201ENST00000555482 181 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 AC008269.2-201ENST00000561915 1105 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 AC010205.1-201ENST00000616668 449 ntBASIC2.75□□□□□ -1.97
CDK5RAP3Q96JB5 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 AL136360.1-201ENST00000503377 1900 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-545P-201ENST00000362681 104 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-1309P-201ENST00000363305 108 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 SNORD87-201ENST00000364849 89 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-1105P-201ENST00000384774 107 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 AL079342.1-201ENST00000401460 267 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 MRPL35P1-201ENST00000404272 572 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 AL358176.2-201ENST00000425769 204 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 AC073910.1-201ENST00000445047 438 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 SNORA40.15-201ENST00000516884 107 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-667P-201ENST00000517186 102 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 MIR5694-201ENST00000581190 76 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 AC068205.3-201ENST00000636385 468 ntBASIC2.74□□□□□ -1.97
CDK5RAP3Q96JB5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 SNORA25B-201ENST00000365507 128 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.498-201ENST00000384460 102 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AL359511.1-201ENST00000402970 211 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 RNA5SP504-201ENST00000410676 117 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 HMGN2P18-201ENST00000450680 270 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC018868.1-201ENST00000491307 315 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC074133.1-201ENST00000515696 183 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-107P-201ENST00000516643 102 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-635P-201ENST00000516651 102 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.713-201ENST00000517013 96 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 RNA5SP490-201ENST00000517141 136 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 AC131280.1-202ENST00000624067 4211 ntBASIC2.73□□□□□ -1.97
CDK5RAP3Q96JB5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-238P-201ENST00000363313 106 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 Y_RNA.143-201ENST00000363520 106 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-438P-201ENST00000365561 103 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 MIR518C-201ENST00000384822 101 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AL357139.1-201ENST00000407792 426 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 MIR548F4-201ENST00000408515 105 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RNU2-48P-201ENST00000410694 191 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 ELOCP20-201ENST00000422460 345 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RNU6-625P-201ENST00000459412 107 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RPL26P26-201ENST00000480251 434 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 RNY3P15-201ENST00000516297 97 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 CYCSP26-201ENST00000534107 320 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AC018448.1-201ENST00000552843 316 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AC233702.2-202ENST00000562547 291 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 MIR3126-201ENST00000577443 74 ntBASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CDK5RAP3Q96JB5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.133-201ENST00000363428 110 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-961P-201ENST00000363893 105 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 Y_RNA.214-201ENST00000364201 112 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-611P-201ENST00000384276 104 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 SNORA67.2-201ENST00000384300 149 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 MIR1283-1-201ENST00000408494 87 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 ELOCP21-201ENST00000412558 336 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 MTND3P2-201ENST00000438452 342 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 SNORA4.4-201ENST00000515921 135 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 RNU6-991P-201ENST00000516168 107 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 PRELID2P1-201ENST00000552837 301 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.71□□□□□ -1.98
CDK5RAP3Q96JB5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.7□□□□□ -1.98
CDK5RAP3Q96JB5 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms