Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SNRNP40Q96DI7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 MIR337-201ENST00000362281 93 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RNU6-414P-201ENST00000363705 104 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.319-201ENST00000365138 92 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 MIR520A-201ENST00000384862 85 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 MIR487A-201ENST00000385009 80 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 MIR9-3-201ENST00000385084 90 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 MIR1253-201ENST00000408273 105 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RNU6-321P-201ENST00000410912 106 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC074085.1-201ENST00000413598 418 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 Z82188.1-201ENST00000436709 154 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 FO393415.2-201ENST00000480085 343 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC011406.1-201ENST00000512440 370 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC026782.1-201ENST00000512952 449 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RNU1-40P-201ENST00000516816 164 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RNU1-97P-201ENST00000516872 164 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC010900.2-201ENST00000604508 210 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC018462.2-201ENST00000605375 395 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC103810.8-201ENST00000607347 118 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 uc_338.5-201ENST00000611839 155 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 AC022513.1-201ENST00000624512 117 ntBASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.69□□□□□ -2.14
SNRNP40Q96DI7 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-112P-201ENST00000363599 104 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-1059P-201ENST00000363752 98 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU5F-3P-201ENST00000363767 117 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 SNORD115-8-201ENST00000363856 82 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 SNORD115-38-201ENST00000365037 82 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNA5SP138-201ENST00000365098 114 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-245P-201ENST00000384020 107 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-975P-201ENST00000384296 105 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-1235P-201ENST00000384559 107 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 MIR586-201ENST00000385035 97 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 MIR30A-201ENST00000385092 71 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNA5SP338-201ENST00000410495 85 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RPS3AP52-201ENST00000435639 297 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 AL021397.1-201ENST00000451806 248 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-498P-201ENST00000459468 107 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU7-57P-201ENST00000459540 60 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 HMGN2P9-201ENST00000476875 229 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 AC116353.2-201ENST00000505332 712 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU7-175P-201ENST00000515915 61 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 SNORA25.14-201ENST00000516481 132 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.68□□□□□ -2.14
SNRNP40Q96DI7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.88-201ENST00000363029 99 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 SNORD81.2-201ENST00000365153 76 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNU4-62P-201ENST00000410125 130 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNU6-57P-201ENST00000411348 103 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC004866.1-201ENST00000411748 78 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC007098.1-201ENST00000420122 367 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC060773.1-201ENST00000421698 310 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC107399.1-201ENST00000451226 265 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC025033.1-201ENST00000463883 194 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC103851.1-201ENST00000506833 274 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNA5SP384-201ENST00000516615 116 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNU6-344P-201ENST00000516635 111 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 RNU6-250P-201ENST00000516958 103 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 SNORD11B-201ENST00000607707 90 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC006001.4-201ENST00000622243 395 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 AC010615.1-201ENST00000594254 1764 ntBASIC1.67□□□□□ -2.14
SNRNP40Q96DI7 ZNF299P-201ENST00000406845 1804 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 RNU6-595P-201ENST00000363944 107 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.482-201ENST00000384377 111 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.490-201ENST00000384413 102 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 Y_RNA.533-201ENST00000384596 114 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 RPL37P10-201ENST00000412884 288 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AP1B1P2-201ENST00000416196 106 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 MTCO3P29-201ENST00000432119 779 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 HSPE1P21-201ENST00000438283 308 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AC098614.3-201ENST00000438957 440 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AC069257.2-201ENST00000441819 155 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AL163540.1-201ENST00000485382 386 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 HMGN1P12-201ENST00000499125 195 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AC025465.3-201ENST00000510570 311 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms