Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 U2.12-201ENST00000613778 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.9-201ENST00000615427 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.11-201ENST00000616345 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.2-201ENST00000616535 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.3-201ENST00000617785 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.19-201ENST00000618602 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 RNU2-1-201ENST00000618664 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.6-201ENST00000619225 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.5-201ENST00000619465 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 U2.10-201ENST00000620268 191 ntBASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
ARHGEF39Q8N4T4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-271P-201ENST00000363858 105 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 RNA5SP240-201ENST00000365355 128 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 SNORA20B-201ENST00000384220 132 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 MIR873-201ENST00000401120 77 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 AL353705.1-201ENST00000433468 480 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 HMGN2P18-201ENST00000450680 270 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 RN7SL807P-201ENST00000470923 297 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 AC010598.1-201ENST00000510378 103 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 PHBP14-201ENST00000512887 367 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 SUMO2P18-201ENST00000518873 252 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 AC100767.1-201ENST00000528178 123 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 MIR3186-201ENST00000577404 85 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ARHGEF39Q8N4T4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.121-201ENST00000363309 113 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-418P-201ENST00000384035 107 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-125P-201ENST00000384505 107 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 SNORA8.3-201ENST00000384679 139 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AL355796.1-201ENST00000406706 323 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AL121890.1-201ENST00000435457 205 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 HSPE1P21-201ENST00000438283 308 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 BX510359.1-201ENST00000456973 237 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-406P-201ENST00000516470 107 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC021269.2-201ENST00000532318 330 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC022616.8-201ENST00000533569 253 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 MIR2682-201ENST00000580305 110 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 AC013412.1-201ENST00000610687 192 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 MIR1248-201ENST00000629190 106 ntBASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ARHGEF39Q8N4T4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC009487.4-201ENST00000624969 3585 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.124-201ENST00000363339 93 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.170-201ENST00000363746 110 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.182-201ENST00000363880 111 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNA5SP387-201ENST00000364226 106 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-187P-201ENST00000384139 106 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-804P-201ENST00000384286 107 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 SNORA48.5-201ENST00000391143 135 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AL355497.1-201ENST00000406262 551 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU6-394P-201ENST00000410735 107 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU2-63P-201ENST00000410792 194 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RPL23AP7-203ENST00000449021 469 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC016925.1-201ENST00000458303 298 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 SNORD65B-201ENST00000459126 73 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNU7-141P-201ENST00000459304 62 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 RNA5SP490-201ENST00000517141 136 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 MIR3144-201ENST00000579460 79 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 Y_RNA.802-201ENST00000614892 130 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 MIR3651-201ENST00000630427 90 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ARHGEF39Q8N4T4 AL159152.1-201ENST00000635019 2587 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms