Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CBX3P7-201ENST00000532876 502 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AL442163.3-201ENST00000554110 156 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC015712.3-201ENST00000559380 164 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 DEFB122-202ENST00000569013 197 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC006600.1-201ENST00000572529 153 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AC016925.2-201ENST00000605108 242 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.45□□□□□ -2.02
VPS52Q8N1B4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS52Q8N1B4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.45□□□□□ -2.02
VPS52Q8N1B4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.158-201ENST00000363651 101 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 RNU1-51P-201ENST00000365345 176 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 RNY3P4-201ENST00000384428 101 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MIR561-201ENST00000385216 97 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MIR549A-201ENST00000385268 96 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.645-201ENST00000391229 102 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 RNU2-32P-201ENST00000411193 191 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MTCO3P19-201ENST00000415864 321 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AC027124.2-201ENST00000428249 105 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AL160004.2-201ENST00000432935 350 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 RPS15AP28-201ENST00000435088 386 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AC009237.7-201ENST00000447357 229 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MTCO3P8-201ENST00000453691 755 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 SNORA25.14-201ENST00000516481 132 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MIR5695-201ENST00000579717 85 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AL132822.1-201ENST00000617063 513 ntBASIC2.44□□□□□ -2.02
VPS52Q8N1B4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
VPS52Q8N1B4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.27-201ENST00000362540 103 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 RNU1-62P-201ENST00000362599 164 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 RNU6-234P-201ENST00000365229 104 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 SNORA18.2-201ENST00000383865 132 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.422-201ENST00000384054 114 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 RNU6-318P-201ENST00000384283 103 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 Y_RNA.485-201ENST00000384395 102 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC004386.2-201ENST00000441858 148 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 RNU6-344P-201ENST00000516635 111 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC022868.1-201ENST00000517767 391 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC025754.2-201ENST00000606491 432 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC005296.1-201ENST00000616145 209 ntBASIC2.43□□□□□ -2.02
VPS52Q8N1B4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS52Q8N1B4 AC091812.1-201ENST00000432235 1948 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS52Q8N1B4 MIRLET7G-201ENST00000362280 84 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 RNU6-1145P-201ENST00000384246 107 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 MIR329-1-201ENST00000385028 80 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 MIR221-201ENST00000385135 110 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 MIR628-201ENST00000385229 95 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AL445305.1-201ENST00000432577 575 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC018634.1-201ENST00000437554 401 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC007395.1-201ENST00000451333 677 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC107222.1-201ENST00000510899 637 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 SCARNA15.1-201ENST00000516384 125 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 RN7SKP49-201ENST00000516675 260 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 RNU2-44P-201ENST00000516795 194 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC093023.1-201ENST00000547375 507 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC104695.3-201ENST00000604052 296 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS52Q8N1B4 AC040896.1-201ENST00000613819 479 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 MIR1248-201ENST00000629190 106 ntBASIC2.42□□□□□ -2.02
VPS52Q8N1B4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS52Q8N1B4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VPS52Q8N1B4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.41□□□□□ -2.02
VPS52Q8N1B4 MTND4P1-201ENST00000457501 1466 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 ZNF72P-201ENST00000425869 1908 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 RNU6-639P-201ENST00000384074 107 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 SNORA64-201ENST00000384674 134 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 MIR449C-201ENST00000516047 92 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.41□□□□□ -2.02
VPS52Q8N1B4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS52Q8N1B4 MIR4680-201ENST00000580906 66 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 MIR5006-201ENST00000583027 110 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 AC010999.1-201ENST00000611856 324 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 AC012640.5-201ENST00000623897 319 ntBASIC2.41□□□□□ -2.02
VPS52Q8N1B4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VPS52Q8N1B4 RNA5SP361-201ENST00000362686 118 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 SNORA25B-201ENST00000365507 128 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 RNU6-793P-201ENST00000384233 104 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 RNU6-611P-201ENST00000384276 104 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 SNORA67.2-201ENST00000384300 149 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 Y_RNA.526-201ENST00000384572 110 ntBASIC2.4□□□□□ -2.03
VPS52Q8N1B4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS52Q8N1B4 AC091179.3-201ENST00000474761 144 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms