Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 Y_RNA.572-201ENST00000384757 98 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 MIR526A2-201ENST00000390198 65 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SNORD37.2-201ENST00000391075 66 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 PTGES3P4-201ENST00000426243 356 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AC107083.1-201ENST00000439643 279 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AL357552.1-201ENST00000445254 415 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RPL23AP70-201ENST00000483361 460 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SCARNA8-201ENST00000515924 131 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-659P-201ENST00000516454 104 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-344P-201ENST00000516635 111 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-453P-201ENST00000516819 85 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AC006199.1-201ENST00000548728 219 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 MIR3646-201ENST00000578301 84 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AL391813.1-201ENST00000603098 260 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SNORD11B-201ENST00000607707 90 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RNVU1-4-201ENST00000612985 164 ntBASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEFF1Q8IYR6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 Y_RNA.243-201ENST00000364481 109 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 Y_RNA.368-201ENST00000365547 113 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AL139281.1-201ENST00000422120 335 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AC002075.2-201ENST00000425207 252 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AL121914.1-201ENST00000450188 156 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 HMGN2P7-201ENST00000456186 273 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 snoU13.26-201ENST00000459452 105 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AC105137.2-201ENST00000569073 466 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AC093732.2-201ENST00000607950 274 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AC011603.4-201ENST00000611325 277 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AP001340.1-201ENST00000624405 217 ntBASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEFF1Q8IYR6 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-1048P-201ENST00000364054 107 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-969P-201ENST00000383900 105 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 RNU6-643P-201ENST00000384018 107 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 Y_RNA.456-201ENST00000384232 111 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AL714022.1-201ENST00000439897 151 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC092991.1-201ENST00000477176 376 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 PDCD5P2-201ENST00000507570 312 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 MIR2114-201ENST00000516645 80 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 MIR4425-201ENST00000580572 84 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 PCGEM1.1-201ENST00000613431 131 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 TCL6_2.1-201ENST00000615162 119 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC244205.2-202ENST00000635781 342 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC068205.3-201ENST00000636385 468 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AL136164.4-201ENST00000625013 2135 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
TMEFF1Q8IYR6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 SNORD87-201ENST00000364849 89 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 Y_RNA.341-201ENST00000365341 102 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AC126124.2-201ENST00000413542 321 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AC245047.8-201ENST00000456455 284 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AL034555.1-201ENST00000604816 211 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AC005562.2-201ENST00000618264 111 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 MIR6844-201ENST00000637122 62 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 AL391516.1-201ENST00000554380 2449 ntBASIC3.22□□□□□ -1.89
TMEFF1Q8IYR6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 420.9 ms