Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 AC023043.3-201ENST00000593113 385 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 AL355297.2-201ENST00000604792 129 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 SCARNA15.3-201ENST00000626315 122 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 SCARNA4.1-201ENST00000628597 123 ntBASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
NPAS4Q8IUM7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.23-201ENST00000362496 106 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.75-201ENST00000362927 97 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 SNORD31B-201ENST00000364977 69 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 MIR95-201ENST00000385072 81 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.637-201ENST00000459424 114 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 HMGN2P9-201ENST00000476875 229 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 AP002001.1-203ENST00000534002 267 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.778-201ENST00000620203 90 ntBASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.69□□□□□ -1.82
NPAS4Q8IUM7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 RNU6-461P-201ENST00000364195 107 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 MIR569-201ENST00000385228 96 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 SNORA40.19-201ENST00000390846 128 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.629-201ENST00000411368 105 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AC006989.1-201ENST00000427212 131 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AL049873.1-201ENST00000480540 376 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 RN7SKP83-201ENST00000516512 178 ntBASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPAS4Q8IUM7 AC009487.4-201ENST00000624969 3585 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 RNU4-17P-201ENST00000365598 141 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 MIR561-201ENST00000385216 97 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 U8.19-201ENST00000459095 133 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 AC010409.1-201ENST00000487382 476 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 RNU2-12P-201ENST00000517216 168 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 TNPO1P3-201ENST00000436471 2662 ntBASIC3.67□□□□□ -1.82
NPAS4Q8IUM7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 MIR627-201ENST00000384979 97 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 RNU6-710P-201ENST00000410424 105 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 RNU4-47P-201ENST00000410876 114 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 Z96811.1-201ENST00000445880 108 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 AP001486.1-201ENST00000463339 476 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 RPS26P15-201ENST00000488067 348 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 RNA5SP490-201ENST00000517141 136 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 MIR3117-201ENST00000584034 78 ntBASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPAS4Q8IUM7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.65□□□□□ -1.82
NPAS4Q8IUM7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.65□□□□□ -1.82
NPAS4Q8IUM7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.65□□□□□ -1.82
NPAS4Q8IUM7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
NPAS4Q8IUM7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NPAS4Q8IUM7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.121-201ENST00000363309 113 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 MIR548B-201ENST00000385247 97 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 RNU6-763P-201ENST00000390865 106 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 RNU6-220P-201ENST00000390919 107 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 AC005840.1-201ENST00000498412 377 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 SNORA70.12-201ENST00000516084 153 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 RNU6-965P-201ENST00000516721 96 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 MIR548X2-201ENST00000579776 100 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 MIR4727-201ENST00000622232 55 ntBASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
NPAS4Q8IUM7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms