Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL117187.1-201ENST00000555482 181 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AL161756.2-201ENST00000604597 246 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHFQ7M4L6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 RNU6-1105P-201ENST00000384774 107 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 RPL21P1-201ENST00000399532 476 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 MIR300-201ENST00000401138 83 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 MIR1283-1-201ENST00000408494 87 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 ELOCP20-201ENST00000422460 345 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 RNU6-625P-201ENST00000459412 107 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 SNORA4.4-201ENST00000515921 135 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 RNA5SP320-201ENST00000516263 124 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 Y_RNA.772-201ENST00000606692 102 ntBASIC2.16□□□□□ -2.06
SHFQ7M4L6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.16□□□□□ -2.06
SHFQ7M4L6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.15□□□□□ -2.06
SHFQ7M4L6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 Y_RNA.26-201ENST00000362539 101 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 RNU6-1309P-201ENST00000363305 108 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 Y_RNA.133-201ENST00000363428 110 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 Y_RNA.276-201ENST00000364732 109 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 Y_RNA.332-201ENST00000365271 113 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 Y_RNA.439-201ENST00000384119 94 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 MIR128-1-201ENST00000384921 82 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 MIR548B-201ENST00000385247 97 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 RAB28P5-201ENST00000427490 651 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 PRELID3BP1-201ENST00000457142 540 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 AC093259.1-201ENST00000509755 300 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 AP002001.1-203ENST00000534002 267 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 AL162730.1-201ENST00000605734 292 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
SHFQ7M4L6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.15□□□□□ -2.07
SHFQ7M4L6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHFQ7M4L6 MIR208A-201ENST00000362287 71 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 Y_RNA.152-201ENST00000363578 100 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 U3.8-201ENST00000363675 217 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 Y_RNA.183-201ENST00000363882 113 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 RNU6-806P-201ENST00000365147 105 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 RNU6-438P-201ENST00000365561 103 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 RNU1-148P-201ENST00000384472 162 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 MIR491-201ENST00000384877 84 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC005002.2-201ENST00000438228 269 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC011753.1-201ENST00000451001 220 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AL137159.1-201ENST00000452808 512 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.14□□□□□ -2.07
SHFQ7M4L6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC055872.1-201ENST00000570978 278 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC136932.1-201ENST00000574771 208 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 MIR4753-201ENST00000585119 83 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC025754.2-201ENST00000606491 432 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 AC067747.1-201ENST00000608026 250 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.14□□□□□ -2.07
SHFQ7M4L6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SHFQ7M4L6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.13□□□□□ -2.07
SHFQ7M4L6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SHFQ7M4L6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHFQ7M4L6 MIR340-201ENST00000362125 95 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-626P-201ENST00000363354 107 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-20P-201ENST00000384106 107 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 SNORA48.2-201ENST00000390926 124 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-1109P-201ENST00000391187 107 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 AL359511.1-201ENST00000402970 211 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 MIR1262-201ENST00000408276 93 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-121P-201ENST00000410525 99 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.13□□□□□ -2.07
SHFQ7M4L6 NDUFB4P10-201ENST00000452541 359 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-107P-201ENST00000516643 102 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 RNU6-635P-201ENST00000516651 102 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 CYCSP26-201ENST00000534107 320 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 AC008269.2-201ENST00000561915 1105 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 AL109918.3-201ENST00000603072 338 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 AC022202.1-201ENST00000613515 211 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
SHFQ7M4L6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHFQ7M4L6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
SHFQ7M4L6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms