Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
RNF220Q5VTB9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
RNF220Q5VTB9 MIR3674-201ENST00000636576 68 ntBASIC2.53□□□□□ -2
RNF220Q5VTB9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 RNU6-626P-201ENST00000363354 107 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.152-201ENST00000363578 100 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 SNORD114-6-201ENST00000364393 72 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 HMGN2P39-201ENST00000398005 273 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 RNU6-221P-201ENST00000459541 99 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 RNA5SP367-201ENST00000516557 118 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 AL021879.1-201ENST00000611756 288 ntBASIC2.52□□□□□ -2.01
RNF220Q5VTB9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
RNF220Q5VTB9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 SNORA63C-201ENST00000364578 129 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 RNU6-20P-201ENST00000384106 107 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AL079342.1-201ENST00000401460 267 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF220Q5VTB9 RPL23AP83-201ENST00000434984 473 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 S100A11P2-201ENST00000467589 312 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF220Q5VTB9 SNORA74D-201ENST00000516404 141 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 SNORA70.24-201ENST00000517233 118 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AC022080.3-201ENST00000544433 482 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AC005176.2-201ENST00000596933 147 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AL109918.3-201ENST00000603072 338 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
RNF220Q5VTB9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF220Q5VTB9 RNU1-58P-201ENST00000362413 163 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.145-201ENST00000363527 102 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.162-201ENST00000363683 102 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.230-201ENST00000364348 109 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 SNORA67.1-201ENST00000364749 141 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 RNU6-738P-201ENST00000384531 106 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 SNORA44-201ENST00000384584 132 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 RNA5SP21-201ENST00000410917 96 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 AC113618.1-201ENST00000416747 285 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.5□□□□□ -2.01
RNF220Q5VTB9 PART1_1.1-201ENST00000611761 217 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
RNF220Q5VTB9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF220Q5VTB9 AL159152.1-201ENST00000635019 2587 ntBASIC2.5□□□□□ -2.01
RNF220Q5VTB9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RNF220Q5VTB9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
RNF220Q5VTB9 RNU6-23P-201ENST00000363283 107 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 RNA5SP493-201ENST00000364115 91 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 SNORA72.2-201ENST00000365028 127 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.462-201ENST00000384268 102 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 MIR518A2-201ENST00000384966 87 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AL138827.1-201ENST00000402666 306 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 RNU5A-5P-201ENST00000411054 116 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AC008134.1-201ENST00000420943 193 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AC073910.1-201ENST00000445047 438 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.49□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.720-201ENST00000517166 92 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AC131281.1-201ENST00000522984 164 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AC004467.1-201ENST00000615678 330 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
RNF220Q5VTB9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RNF220Q5VTB9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.153-201ENST00000363615 91 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RNU6-525P-201ENST00000363685 104 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RNU6-130P-201ENST00000411112 103 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 BX510359.4-201ENST00000423750 193 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC005002.2-201ENST00000438228 269 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RPS12P2-201ENST00000439728 269 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC025750.2-201ENST00000442609 450 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AL135938.1-201ENST00000443141 297 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AP001486.1-201ENST00000463339 476 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RNU6-397P-201ENST00000516226 104 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RNU7-193P-201ENST00000516723 65 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC025647.1-201ENST00000517879 253 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AP002001.1-203ENST00000534002 267 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 MYL12BP1-201ENST00000569826 507 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 MIR3684-201ENST00000579779 74 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC008737.2-201ENST00000599446 118 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AL360085.1-201ENST00000604713 532 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RAC1P9-201ENST00000604990 392 ntBASIC2.48□□□□□ -2.01
RNF220Q5VTB9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
RNF220Q5VTB9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.48□□□□□ -2.01
RNF220Q5VTB9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RNF220Q5VTB9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RNF220Q5VTB9 AL365361.1-201ENST00000566942 3481 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RNF220Q5VTB9 RNU6-1266P-201ENST00000362794 105 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 Y_RNA.143-201ENST00000363520 106 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 RNU6-1240P-201ENST00000365155 104 ntBASIC2.47□□□□□ -2.01
RNF220Q5VTB9 MIR491-201ENST00000384877 84 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms