Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPS29P20-201ENST00000489592 171 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 RPL23AP54-201ENST00000495129 419 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 RNA5SP153-201ENST00000516498 76 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 MIR4644-201ENST00000579929 84 ntBASIC4.44□□□□□ -1.7
RC3H1Q5TC82 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RC3H1Q5TC82 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.43□□□□□ -1.7
RC3H1Q5TC82 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RNU6-573P-201ENST00000383938 106 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 SNORD116-13-201ENST00000384408 92 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RPS3AP1-201ENST00000413190 320 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RPL23AP82-202ENST00000427528 469 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RPL23AP7-203ENST00000449021 469 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 CENPBD1P1-201ENST00000464061 469 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RPL23AP94-201ENST00000512518 302 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 RNU6-970P-201ENST00000516312 107 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 IGKV1-22-201ENST00000524313 326 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 AL049861.1-201ENST00000603130 150 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 AC015726.2-201ENST00000620112 122 ntBASIC4.43□□□□□ -1.7
RC3H1Q5TC82 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RC3H1Q5TC82 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RC3H1Q5TC82 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.43□□□□□ -1.7
RC3H1Q5TC82 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 AC007256.1-201ENST00000392253 2765 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 MIR873-201ENST00000401120 77 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 HMGN2P7-201ENST00000456186 273 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 RPL36AP21-201ENST00000490372 323 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 SNORA70.14-201ENST00000516205 110 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 AC005972.2-201ENST00000604690 348 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 AL159152.1-201ENST00000635019 2587 ntBASIC4.42□□□□□ -1.7
RC3H1Q5TC82 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.42□□□□□ -1.7
RC3H1Q5TC82 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RNU4-15P-201ENST00000362613 141 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.52-201ENST00000362760 96 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 SNORA7.2-201ENST00000364446 145 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 MIR488-201ENST00000365739 83 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 DYNLT3P1-201ENST00000378574 347 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 Y_RNA.528-201ENST00000384575 108 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 MIR607-201ENST00000385241 96 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RNU2-70P-201ENST00000410718 179 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 HMGN2P20-201ENST00000437531 273 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 AL021397.1-201ENST00000451806 248 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RPL27AP5-201ENST00000469428 449 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RN7SL594P-201ENST00000470590 287 ntBASIC4.41□□□□□ -1.7
RC3H1Q5TC82 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RC3H1Q5TC82 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RC3H1Q5TC82 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.4□□□□□ -1.7
RC3H1Q5TC82 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
RC3H1Q5TC82 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RC3H1Q5TC82 RNU6-600P-201ENST00000362524 99 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 RNU6-529P-201ENST00000363383 104 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 RNU6-1113P-201ENST00000384348 107 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 RNU4-47P-201ENST00000410876 114 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.4□□□□□ -1.71
RC3H1Q5TC82 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
RC3H1Q5TC82 RN7SKP43-201ENST00000516173 320 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 RNU6-1073P-201ENST00000517182 106 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 AC025647.1-201ENST00000517879 253 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 AC097639.2-201ENST00000603159 172 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 AL442128.1-201ENST00000615151 90 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RC3H1Q5TC82 AC007656.2-201ENST00000624902 4547 ntBASIC4.4□□□□□ -1.71
RC3H1Q5TC82 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.4□□□□□ -1.71
RC3H1Q5TC82 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RC3H1Q5TC82 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RC3H1Q5TC82 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.634-201ENST00000364811 113 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 Y_RNA.549-201ENST00000384657 102 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 SNORA1.3-201ENST00000384676 136 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 RNU6-440P-201ENST00000390882 105 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 MIR891A-201ENST00000401237 79 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 AL121890.1-201ENST00000435457 205 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 MTATP6P21-201ENST00000440681 189 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 UBE2DNL-203ENST00000474922 222 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 RN7SKP12-201ENST00000516275 143 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 SNORA18.4-201ENST00000516440 124 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 RNA5SP281-201ENST00000516504 135 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 RNU1-104P-201ENST00000517280 175 ntBASIC4.39□□□□□ -1.71
RC3H1Q5TC82 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms