Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.85□□□□□ -1.79
COL13A1Q5TAT6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
COL13A1Q5TAT6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.85□□□□□ -1.79
COL13A1Q5TAT6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 RNU6-643P-201ENST00000384018 107 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 RNU6-198P-201ENST00000384258 104 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 RNU1-57P-201ENST00000384491 166 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 AL139132.1-201ENST00000431587 344 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 RNU7-141P-201ENST00000459304 62 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 SNRPGP3-201ENST00000469405 227 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 SCARNA8-201ENST00000515924 131 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 MIR4724-201ENST00000579485 89 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 MIR3658-201ENST00000636291 56 ntBASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.84□□□□□ -1.79
COL13A1Q5TAT6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.8
COL13A1Q5TAT6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL13A1Q5TAT6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
COL13A1Q5TAT6 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AP001486.2-201ENST00000561652 5113 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AC010680.1-201ENST00000590024 3590 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AC068700.1-201ENST00000565862 3754 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 RNU6-1048P-201ENST00000364054 107 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 Y_RNA.420-201ENST00000384043 110 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 SNORD37.2-201ENST00000391075 66 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 RNU2-49P-201ENST00000410666 184 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AC006461.1-201ENST00000412637 326 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AL035461.1-201ENST00000421490 332 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 HMGN2P20-201ENST00000437531 273 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 RPL23AP62-201ENST00000463396 453 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 RPS29P21-201ENST00000496272 170 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 RNU6-453P-201ENST00000516819 85 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AC090877.1-201ENST00000561418 344 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 AC091564.4-201ENST00000533934 2194 ntBASIC3.83□□□□□ -1.8
COL13A1Q5TAT6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 MIR367-201ENST00000362299 68 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 RNU6-728P-201ENST00000365375 104 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 RNY3P5-201ENST00000384127 102 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 MIR586-201ENST00000385035 97 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 MIR15B-201ENST00000385045 98 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 AC010099.1-201ENST00000455434 375 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 RNU6-1211P-201ENST00000459179 105 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 uc_338.14-201ENST00000613162 166 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 AP003355.3-201ENST00000623465 114 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 AC093908.1-201ENST00000623125 8092 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.82□□□□□ -1.8
COL13A1Q5TAT6 AL159152.1-201ENST00000635019 2587 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 Y_RNA.542-201ENST00000384641 111 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AC063976.3-201ENST00000426849 329 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AC245047.8-201ENST00000456455 284 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 RNU7-197P-201ENST00000458836 62 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 RN7SKP282-201ENST00000516824 299 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AP000867.2-201ENST00000532468 320 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AL353997.5-201ENST00000618886 171 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AP001340.1-201ENST00000624405 217 ntBASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL13A1Q5TAT6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 AL513302.2-201ENST00000562313 1842 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 Y_RNA.229-201ENST00000364347 113 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 Y_RNA.572-201ENST00000384757 98 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 MIR184-201ENST00000384962 84 ntBASIC3.8□□□□□ -1.8
COL13A1Q5TAT6 MIR548B-201ENST00000385247 97 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms