Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RNU6-661P-201ENST00000362409 107 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 RNU6-1189P-201ENST00000383958 107 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 MIR889-201ENST00000401280 79 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 RNU6-733P-201ENST00000410759 104 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXC1Q12948 MIR449C-201ENST00000516047 92 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.97□□□□□ -1.77
FOXC1Q12948 MIR4513-201ENST00000581077 86 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 AC233702.9-201ENST00000581528 203 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
FOXC1Q12948 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.97□□□□□ -1.77
FOXC1Q12948 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
FOXC1Q12948 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
FOXC1Q12948 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
FOXC1Q12948 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXC1Q12948 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
FOXC1Q12948 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
FOXC1Q12948 Y_RNA.253-201ENST00000364562 112 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 SNORD31B-201ENST00000364977 69 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 U8.11-201ENST00000384699 133 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.96□□□□□ -1.78
FOXC1Q12948 U8.18-201ENST00000459285 133 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 RN7SL293P-201ENST00000481765 281 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 RNU6-1006P-201ENST00000516998 103 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 CYCSP30-201ENST00000546447 172 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 Y_RNA.773-201ENST00000607168 90 ntBASIC3.96□□□□□ -1.78
FOXC1Q12948 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXC1Q12948 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXC1Q12948 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
FOXC1Q12948 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXC1Q12948 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
FOXC1Q12948 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.96□□□□□ -1.78
FOXC1Q12948 AC017071.1-201ENST00000564407 2204 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXC1Q12948 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 AC010889.1-201ENST00000566193 2666 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 Y_RNA.4-201ENST00000362333 112 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 Y_RNA.242-201ENST00000364473 110 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 MIR520G-201ENST00000385064 90 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 MIR147B-201ENST00000390185 80 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 Y_RNA.607-201ENST00000410597 98 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 RNU6-887P-201ENST00000410660 100 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC010099.1-201ENST00000455434 375 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC112771.1-201ENST00000463581 102 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC010401.1-201ENST00000463867 348 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 PPBPP1-201ENST00000510807 373 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 RNA5SP249-201ENST00000516127 99 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 Y_RNA.705-201ENST00000516862 110 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.95□□□□□ -1.78
FOXC1Q12948 AC015912.2-201ENST00000571053 181 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AC073413.2-201ENST00000604332 360 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 AL160290.3-201ENST00000604869 165 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
FOXC1Q12948 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.95□□□□□ -1.78
FOXC1Q12948 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
FOXC1Q12948 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 AL672167.1-203ENST00000641299 2975 ntBASIC3.95□□□□□ -1.78
FOXC1Q12948 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
FOXC1Q12948 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXC1Q12948 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXC1Q12948 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXC1Q12948 Y_RNA.95-201ENST00000363079 95 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 Y_RNA.155-201ENST00000363632 101 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 RNU6-409P-201ENST00000384114 104 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 SNORA18-201ENST00000384416 132 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 MIR605-201ENST00000385078 83 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXC1Q12948 AC099677.2-201ENST00000436385 175 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 CYCSP35-201ENST00000451978 304 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 RNA5SP103-201ENST00000459503 118 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 AC078918.1-201ENST00000498515 228 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 SCGB1D5P-201ENST00000515134 247 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 RNA5SP468-201ENST00000516782 93 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 AC087685.1-201ENST00000587507 141 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 MIR7975-201ENST00000619350 68 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 MIR548BB-201ENST00000626714 66 ntBASIC3.94□□□□□ -1.78
FOXC1Q12948 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
FOXC1Q12948 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
FOXC1Q12948 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXC1Q12948 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXC1Q12948 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.94□□□□□ -1.78
FOXC1Q12948 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
FOXC1Q12948 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXC1Q12948 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 Z73965.1-201ENST00000623412 2297 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
FOXC1Q12948 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXC1Q12948 AC027290.2-201ENST00000623210 18662 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXC1Q12948 RNU6-743P-201ENST00000364151 106 ntBASIC3.93□□□□□ -1.78
FOXC1Q12948 RNU6-1229P-201ENST00000364295 107 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms