Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-1.58□□□□□ -2.66
TFF3Q07654 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.58□□□□□ -2.66
TFF3Q07654 SNORA75.1-201ENST00000391130 148 ntBASIC-1.58□□□□□ -2.66
TFF3Q07654 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.58□□□□□ -2.66
TFF3Q07654 AC021146.6-201ENST00000514659 117 ntBASIC-1.58□□□□□ -2.66
TFF3Q07654 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.58□□□□□ -2.66
TFF3Q07654 AP002802.2-201ENST00000605877 235 ntBASIC-1.58□□□□□ -2.66
TFF3Q07654 RNU6-1339P-201ENST00000363574 91 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-116P-201ENST00000384042 109 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-440P-201ENST00000390882 105 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-932P-201ENST00000391108 106 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 MIR1298-201ENST00000408783 112 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 AL354692.1-201ENST00000423044 315 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RPS24P1-201ENST00000438550 371 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 AC020550.1-201ENST00000447385 163 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 SUMO1P1-201ENST00000497904 306 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-1.59□□□□□ -2.66
TFF3Q07654 RNA5SP216-201ENST00000516111 123 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNU6-881P-201ENST00000516813 102 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 RNA5SP66-201ENST00000517178 101 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 AC022217.4-201ENST00000604389 163 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 AC006441.5-201ENST00000612680 209 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 AP000676.3-201ENST00000623299 569 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 MIR1246-201ENST00000636535 73 ntBASIC-1.59□□□□□ -2.66
TFF3Q07654 MIR101-2-201ENST00000362195 79 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 RNY4P27-201ENST00000363341 96 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 RNU6-613P-201ENST00000410412 108 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AL133396.1-201ENST00000432048 687 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 MTATP6P30-201ENST00000443540 664 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AL606517.1-201ENST00000446914 387 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AL392103.1-201ENST00000447000 198 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AL500527.2-201ENST00000454105 95 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AL139824.2-201ENST00000458731 1095 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AC104629.1-201ENST00000494226 508 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AC006380.1-201ENST00000603598 186 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 AC018889.1-201ENST00000605372 397 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 MTND5P17-201ENST00000418405 1603 ntBASIC-1.6□□□□□ -2.67
TFF3Q07654 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-1.6□□□□□ -2.67
TFF3Q07654 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 RNU6-512P-201ENST00000364438 103 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.61□□□□□ -2.67
TFF3Q07654 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 UBE2D3P3-201ENST00000426992 425 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 TIMM9P3-201ENST00000428659 274 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 POLR2KP2-201ENST00000438155 177 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 RPL37P6-201ENST00000460682 294 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-1.61□□□□□ -2.67
TFF3Q07654 RNU6-572P-201ENST00000516724 80 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 RNU1-29P-201ENST00000606574 126 ntBASIC-1.61□□□□□ -2.67
TFF3Q07654 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.61□□□□□ -2.67
TFF3Q07654 snoZ40.1-201ENST00000364540 72 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 RNU6-637P-201ENST00000384050 107 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-1.62□□□□□ -2.67
TFF3Q07654 AC092170.1-201ENST00000440211 356 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-1.62□□□□□ -2.67
TFF3Q07654 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 AC009902.1-201ENST00000519351 183 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.62□□□□□ -2.67
TFF3Q07654 AL139286.2-201ENST00000606838 396 ntBASIC-1.62□□□□□ -2.67
TFF3Q07654 MTND4P9-201ENST00000507819 1346 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 SNORA12-201ENST00000391162 147 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 AL590002.1-201ENST00000406554 418 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 AL050341.1-201ENST00000447743 313 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-1.63□□□□□ -2.67
TFF3Q07654 AC010468.3-201ENST00000508225 458 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 MIR3925-201ENST00000584674 77 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 AC008250.2-201ENST00000615261 205 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 BX322639.1-202ENST00000423987 2213 ntBASIC-1.63□□□□□ -2.67
TFF3Q07654 AP000568.1-201ENST00000282964 442 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 SNORD114-25-201ENST00000363742 72 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 MIR301A-201ENST00000385261 86 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 MRPL42P3-201ENST00000401492 326 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 AC007283.2-201ENST00000424739 197 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.64□□□□□ -2.67
TFF3Q07654 AC110760.3-202ENST00000515177 371 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.64□□□□□ -2.67
TFF3Q07654 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-1.64□□□□□ -2.67
TFF3Q07654 MTCYBP33-201ENST00000575007 1130 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 MTND4P21-201ENST00000453886 1357 ntBASIC-1.64□□□□□ -2.67
TFF3Q07654 RNA5SP48-201ENST00000363969 126 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 ELOCP21-201ENST00000412558 336 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 RNU2-34P-201ENST00000516534 121 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 AC010525.2-201ENST00000590920 195 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 BNIP3P24-201ENST00000593398 557 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 VN1R88P-201ENST00000596787 292 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 AL606834.3-201ENST00000602615 496 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 MIR6507-201ENST00000613630 70 ntBASIC-1.65□□□□□ -2.67
TFF3Q07654 AC099786.3-201ENST00000565735 1410 ntBASIC-1.66□□□□□ -2.67
TFF3Q07654 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 RNA5SP117-201ENST00000365294 118 ntBASIC-1.66□□□□□ -2.68
TFF3Q07654 RNU6-424P-201ENST00000384367 105 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms