Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 Y_RNA.570-201ENST00000384750 101 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 MIR181A2-201ENST00000384863 110 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 RNU5A-5P-201ENST00000411054 116 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 RNA5SP24-201ENST00000516478 95 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 HSPE1P18-201ENST00000517602 280 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.62□□□□□ -1.99
E2F1Q01094 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.62□□□□□ -1.99
E2F1Q01094 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.62□□□□□ -1.99
E2F1Q01094 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.62□□□□□ -1.99
E2F1Q01094 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.62□□□□□ -1.99
E2F1Q01094 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.62□□□□□ -1.99
E2F1Q01094 MIR3199-1-201ENST00000582434 88 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 AC064859.1-201ENST00000624741 174 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 AC090517.3-201ENST00000625170 141 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.62□□□□□ -1.99
E2F1Q01094 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
E2F1Q01094 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
E2F1Q01094 AC092593.1-201ENST00000515413 1815 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 AC138915.1-201ENST00000565427 1685 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.61□□□□□ -1.99
E2F1Q01094 MIR335-201ENST00000362173 94 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RNU6-727P-201ENST00000363592 107 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RNU6-379P-201ENST00000363813 104 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RNU6-102P-201ENST00000384485 104 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RNU6-1274P-201ENST00000384557 107 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 Y_RNA.602-201ENST00000410535 92 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 ELOCP21-201ENST00000412558 336 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.61□□□□□ -1.99
E2F1Q01094 AC108059.2-201ENST00000434626 151 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 HSPE1P25-201ENST00000455484 251 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RNU6-625P-201ENST00000459412 107 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.61□□□□□ -1.99
E2F1Q01094 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 Y_RNA.680-201ENST00000516441 93 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
E2F1Q01094 AC105245.1-201ENST00000581934 244 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 MIR5006-201ENST00000583027 110 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 RPL17P51-201ENST00000605218 238 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
E2F1Q01094 SDR42E1P4-201ENST00000620894 481 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 AC127459.3-201ENST00000624328 466 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 CTSLP2-204ENST00000629029 392 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
E2F1Q01094 AC080128.1-201ENST00000474389 1917 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
E2F1Q01094 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
E2F1Q01094 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
E2F1Q01094 MTND5P6-201ENST00000422338 1798 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 VTRNA1-1-201ENST00000363120 99 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 Y_RNA.237-201ENST00000364439 102 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 SNORD21-201ENST00000383953 95 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 Y_RNA.415-201ENST00000384012 112 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 Y_RNA.489-201ENST00000384410 101 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 SNORA67.4-201ENST00000384688 142 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 MIR218-1-201ENST00000384999 110 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 AL033519.2-201ENST00000403958 392 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 Y_RNA.597-201ENST00000410463 100 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RNA5SP504-201ENST00000410676 117 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RPL39P38-201ENST00000467018 153 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RPS27AP9-201ENST00000477681 438 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 MTND1P19-201ENST00000511780 315 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 RNU2-44P-201ENST00000516795 194 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.6□□□□□ -1.99
E2F1Q01094 AC012433.1-201ENST00000588916 398 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 SNORD113-5-201ENST00000607261 78 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 SNORD11B-201ENST00000607707 90 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.6□□□□□ -1.99
E2F1Q01094 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
E2F1Q01094 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.6□□□□□ -1.99
E2F1Q01094 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
E2F1Q01094 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.59□□□□□ -1.99
E2F1Q01094 AL391987.6-201ENST00000305671 199 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 Y_RNA.16-201ENST00000362421 102 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 RNU4-90P-201ENST00000362773 141 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
E2F1Q01094 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
E2F1Q01094 RNU4-30P-201ENST00000410245 143 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AL390729.2-201ENST00000416137 156 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 RAB28P5-201ENST00000427490 651 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AC080013.2-201ENST00000460866 323 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 SEPT14P8-201ENST00000508026 178 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 RNU6-1338P-201ENST00000516328 91 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 RNU6-794P-201ENST00000517261 64 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F1Q01094 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F1Q01094 AC055872.1-201ENST00000570978 278 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.59□□□□□ -1.99
E2F1Q01094 AC005176.2-201ENST00000596933 147 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AC011373.1-201ENST00000607270 237 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AC069294.1-201ENST00000608397 350 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 AC090425.1-201ENST00000610007 140 ntBASIC2.59□□□□□ -1.99
E2F1Q01094 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
E2F1Q01094 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
E2F1Q01094 MIR410-201ENST00000362222 80 ntBASIC2.58□□□□□ -2
E2F1Q01094 RNU6-944P-201ENST00000364023 107 ntBASIC2.58□□□□□ -2
E2F1Q01094 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms