Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-308P-201ENST00000390957 107 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CX3CL1P78423 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CL1P78423 AC009963.1-201ENST00000417265 157 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 HMGN2P3-201ENST00000433603 273 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 HMGN2P5-201ENST00000436882 273 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 UQCRBP2-201ENST00000447827 297 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 RNU7-57P-201ENST00000459540 60 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.87□□□□□ -2.11
CX3CL1P78423 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 RNU6-911P-201ENST00000516523 104 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
CX3CL1P78423 AL442163.3-201ENST00000554110 156 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.87□□□□□ -2.11
CX3CL1P78423 AC046143.2-201ENST00000609789 160 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 AC013412.1-201ENST00000610687 192 ntBASIC1.87□□□□□ -2.11
CX3CL1P78423 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CL1P78423 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CL1P78423 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.87□□□□□ -2.11
CX3CL1P78423 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CX3CL1P78423 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
CX3CL1P78423 ZNF658B-202ENST00000615961 3375 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 Y_RNA.31-201ENST00000362574 102 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 Y_RNA.39-201ENST00000362620 98 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 Y_RNA.111-201ENST00000363248 100 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 RNU1-51P-201ENST00000365345 176 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 RNY3P4-201ENST00000384428 101 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 RNU6-57P-201ENST00000411348 103 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 AC007677.1-201ENST00000445757 515 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 NDUFB4P10-201ENST00000452541 359 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.86□□□□□ -2.11
CX3CL1P78423 MIR4672-201ENST00000583126 81 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 VN1R91P-201ENST00000594377 169 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 SNORD58B-201ENST00000607313 66 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 AC006157.1-201ENST00000611750 366 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 AC007485.1-201ENST00000616755 206 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 snoZ196.1-201ENST00000625269 89 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.86□□□□□ -2.11
CX3CL1P78423 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CX3CL1P78423 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CX3CL1P78423 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CX3CL1P78423 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CX3CL1P78423 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
CX3CL1P78423 AL159152.1-201ENST00000635019 2587 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CX3CL1P78423 Y_RNA.11-201ENST00000362375 109 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 RNU6-708P-201ENST00000384217 107 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 RNU6-474P-201ENST00000384243 107 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 SNORD12B-201ENST00000410433 91 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 ELOCP21-201ENST00000412558 336 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 MCFD2P1-201ENST00000417812 300 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 MTCO2P12-201ENST00000427426 682 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CL1P78423 SNORA40.9-201ENST00000515895 93 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 RN7SKP295-201ENST00000517264 153 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 CYCSP23-201ENST00000519781 313 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
CX3CL1P78423 AC083806.3-201ENST00000614016 455 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 AC022513.1-201ENST00000624512 117 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 AL606534.2-204ENST00000635008 178 ntBASIC1.85□□□□□ -2.11
CX3CL1P78423 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.84□□□□□ -2.11
CX3CL1P78423 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
CX3CL1P78423 RNA5SP37-201ENST00000365420 130 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CX3CL1P78423 AL354751.2-201ENST00000415471 210 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 AC060773.1-201ENST00000421698 310 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 PMCHL1-202ENST00000423102 261 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 RPS15AP28-201ENST00000435088 386 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 MTND4P19-201ENST00000446659 478 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CL1P78423 PCNPP5-201ENST00000452246 481 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
CX3CL1P78423 Y_RNA.631-201ENST00000459607 101 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 RNU6-107P-201ENST00000516643 102 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 MIR5007-201ENST00000583098 95 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 MIR5188-201ENST00000583467 113 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 AL138825.1-201ENST00000618587 192 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 MIR6852-201ENST00000621699 66 ntBASIC1.84□□□□□ -2.11
CX3CL1P78423 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.12
CX3CL1P78423 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.12
CX3CL1P78423 AP006437.1-201ENST00000641440 3685 ntBASIC1.84□□□□□ -2.12
CX3CL1P78423 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CX3CL1P78423 Y_RNA.27-201ENST00000362540 103 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 Y_RNA.80-201ENST00000362996 102 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 SNORA6-201ENST00000384033 151 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 RNU6-926P-201ENST00000384075 107 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 Y_RNA.485-201ENST00000384395 102 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 MIR23A-201ENST00000385245 73 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CX3CL1P78423 SNORD78.2-201ENST00000391076 69 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 MIR1185-2-201ENST00000408687 86 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CX3CL1P78423 AC016909.1-201ENST00000415916 166 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 MTND2P29-201ENST00000438595 412 ntBASIC1.83□□□□□ -2.12
CX3CL1P78423 AL353689.1-201ENST00000438895 199 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms